HHsearch alignment for GI: 254780132 and conserved domain: PRK09435

>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=96.37  E-value=0.054  Score=32.94  Aligned_cols=117  Identities=17%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHCC--CEEEEE-EECCCCCCCC-CCCCCCHHHCCHHHHHHH-HCCCEEEEEEEECCCE
Q ss_conf             1999987999998999999985189--817998-6027888988-334642010014554221-0278187666612870
Q gi|254780132|r    3 HIFVLIGASGVGKTTIAKQVVLNSE--YLVMPV-GVTTRRPRVD-EKQYIDYRFISQSQFKGW-KHTGLFIETTKVRDEY   77 (186)
Q Consensus         3 kiivi~GpsGsGK~tl~~~L~~~~~--~~~~~v-~~TTR~~R~~-E~~g~dY~Fvs~~~F~~~-i~~~~FiE~~~~~g~~   77 (186)
T Consensus        50 ~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~sgGaiLG------Dr~Rm~~~~~~~~~fiRs~~srg~l  123 (325)
T PRK09435         50 LRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTRTGGSILG------DKTRMERLSRHPNAFIRPSPSSGTL  123 (325)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHH------HHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf             5997427999868899999999999679858999978999988861010------3888876147998488406778886


Q ss_pred             EEEECCCHHH---HHHHCCCCCCCCCCCHHHHH----HHCCCCCEEEEHCCCCCHHHH
Q ss_conf             4544220023---34310242002542000244----420543200000023218999
Q gi|254780132|r   78 YGYLKEDINN---PMEHGYDILLILTHQGLAPL----KKLYEDQVTSIFIAPPSEAEL  128 (186)
Q Consensus        78 YGts~~~i~~---~~~~g~~~il~id~~G~~~l----k~~~~~~~~~IfI~pps~~~L  128 (186)
T Consensus       124 gg~~~~~~~~~~~~~a~g~d~i~i-ETvGvGQ~e~~v~~~~--d~~~~~~~p~~GD~~  178 (325)
T PRK09435        124 GGVARKTRETMLLCEAAGFDVILV-ETVGVGQSETAVAGMV--DFFLLLQLPGAGDEL  178 (325)
T ss_pred             CCCCHHHHHHHHHHHHCCCCEEEE-EECCCCHHHHHHHHHC--CEEEEEECCCCCCHH
T ss_conf             773354999999999779998999-7067771488998742--668888358876088