HHsearch alignment for GI: 254780132 and conserved domain: PRK13341
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.
Probab=96.62 E-value=0.0032 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=24.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 999879999989999999851898179986027
Q gi|254780132|r 5 FVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTT 37 (186)
Q Consensus 5 ivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TT 37 (186)
T Consensus 55 ~Il~GPPGtGKTTLA~iIA~~t~~~F~~lsAv~ 87 (726)
T PRK13341 55 LILYGPPGVGKTTLARIIANHTRAHFSSLNAVL 87 (726)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 788897999999999999887488679985620