HHsearch alignment for GI: 254780132 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=96.75  E-value=0.0018  Score=41.83  Aligned_cols=39  Identities=23%  Similarity=0.232  Sum_probs=27.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEE-ECCCCC
Q ss_conf             719999879999989999999851898179986-027888
Q gi|254780132|r    2 AHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVG-VTTRRP   40 (186)
Q Consensus         2 ~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~-~TTR~~   40 (186)
T Consensus       162 r~NIlIsGgTGSGKTTllnALl~~IP~~eRIvtIEDt~EL  201 (343)
T PRK13851        162 RLTMLLCGPTGSGKTTMSKTLISAIPPQERLITIEDTLEL  201 (343)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCC
T ss_conf             9889998889861999999999628965527996115002