HHsearch alignment for GI: 254780132 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=96.70 E-value=0.002 Score=41.58 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=26.9
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCEEEEEE-ECCCC
Q ss_conf 19999879999989999999851898179986-02788
Q gi|254780132|r 3 HIFVLIGASGVGKTTIAKQVVLNSEYLVMPVG-VTTRR 39 (186)
Q Consensus 3 kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~-~TTR~ 39 (186)
T Consensus 161 ~NilI~G~TgSGKTTll~aL~~~ip~~eRiitIEDt~E 198 (332)
T PRK13900 161 KNIIISGGTSTGKTTFTNAALREIPAIERLITVEDARE 198 (332)
T ss_pred CCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCHH
T ss_conf 71999888898899999999835895353566314066