HHsearch alignment for GI: 254780132 and conserved domain: PRK13947
>PRK13947 shikimate kinase; Provisional.
Probab=98.27 E-value=6.9e-06 Score=56.50 Aligned_cols=147 Identities=20% Similarity=0.192 Sum_probs=68.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC--CCC-------CCCCCCHHHCCHHHHHHHHCCCEEEEEE
Q ss_conf 9719999879999989999999851898179986027888--988-------3346420100145542210278187666
Q gi|254780132|r 1 MAHIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTTRRP--RVD-------EKQYIDYRFISQSQFKGWKHTGLFIETT 71 (186)
Q Consensus 1 m~kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TTR~~--R~~-------E~~g~dY~Fvs~~~F~~~i~~~~FiE~~ 71 (186)
T Consensus 1 mkn-I~LiG~mGsGKTtiGk~La~~L-~~~fiD--~D~~Ie~~~g~sI~eIf~~~GE~-------~FR~~E~~--~l~-- 65 (171)
T PRK13947 1 MKN-IVLIGFMGTGKTTVGKKVATTL-SFGFID--TDKEIEKMAGMTVSEIFEKDGEV-------RFRSLEKA--AVR-- 65 (171)
T ss_pred CCC-EEEECCCCCCHHHHHHHHHHHH-CCCEEE--CHHHHHHHCCCCHHHHHHHHCHH-------HHHHHHHH--HHH--
T ss_conf 985-8997999998899999999997-969898--74999988299889999984899-------99999999--999--
Q ss_pred EECCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEHCCCCCHHHHHHHHHHCC-------CCCHHHHH
Q ss_conf 61287045442200233431024200254200024442054320000002321899998762014-------54489999
Q gi|254780132|r 72 KVRDEYYGYLKEDINNPMEHGYDILLILTHQGLAPLKKLYEDQVTSIFIAPPSEAELIQRRIKRR-------EDIPFNLD 144 (186)
Q Consensus 72 ~~~g~~YGts~~~i~~~~~~g~~~il~id~~G~~~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~-------~e~~~~i~ 144 (186)
T Consensus 66 ~~~~--------~~~~VistGGG~v~--~~~n~~~l~~----~g~vi~L~~-~~~~l~~Rl~~~~~RPll~~~~~~~~l~ 130 (171)
T PRK13947 66 KAAR--------LKNLVIATGGGVVL--NPENIVQLRK----NGVLICLVA-RPEVILRRIKKKKDRPLLMVGNPEERIR 130 (171)
T ss_pred HHCC--------CCCEEEECCCCCCC--CHHHHHHHHH----CCEEEEECC-CHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf 7403--------68979978985006--9999999996----898999739-9999999972899999798998799999
Q ss_pred H----HHHHHHHCCCEEEECC--CHHHHHHHHHHHHHHHH
Q ss_conf 9----9998653598899939--78999999999999997
Q gi|254780132|r 145 P----DLFGKNHSYSFTIVNN--HLPTACRQVGLIREFVK 178 (186)
Q Consensus 145 ~----r~~~~~~~fD~iIiNd--dle~a~~~l~~Iie~l~ 178 (186)
T Consensus 131 ~l~~~R~~~Y-~~Ad~~I~~~~~s~~ei~~~Ii~~~~k~k 169 (171)
T PRK13947 131 ELLKEREPFY-RFADFTIDTSDMTIDEVAEEIIKAYIKLK 169 (171)
T ss_pred HHHHHHHHHH-HHCCEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999-97698988998999999999999999720