HHsearch alignment for GI: 254780132 and conserved domain: TIGR02639
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..
Probab=97.22 E-value=0.00026 Score=46.98 Aligned_cols=27 Identities=37% Similarity=0.621 Sum_probs=22.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 9999879999989999999851898179
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEYLVM 31 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~~~~ 31 (186)
T Consensus 529 SFLF~GPTGVGKTElak~LA~~L-Gv~l 555 (774)
T TIGR02639 529 SFLFVGPTGVGKTELAKQLAEEL-GVHL 555 (774)
T ss_pred EEEEECCCCCCHHHHHHHHHHHH-CCHH
T ss_conf 88864798962578899999970-8200