HHsearch alignment for GI: 254780132 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=96.26 E-value=0.0036 Score=40.04 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=27.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCC-----EEEEEEECCCCCCCCCCCCCCHH
Q ss_conf 999879999989999999851898-----17998602788898833464201
Q gi|254780132|r 5 FVLIGASGVGKTTIAKQVVLNSEY-----LVMPVGVTTRRPRVDEKQYIDYR 51 (186)
Q Consensus 5 ivi~GpsGsGK~tl~~~L~~~~~~-----~~~~v~~TTR~~R~~E~~g~dY~ 51 (186)
T Consensus 142 Ilv~GGTGSGKTTLaNAlla~I~~l~~P~dR~vIiEDT~ElQC~A~N~V~lr 193 (315)
T TIGR02782 142 ILVVGGTGSGKTTLANALLAEIAKLNDPDDRVVIIEDTAELQCAAENLVALR 193 (315)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEEEE
T ss_conf 8998145885799999999988521699961899854713201378706874