HHsearch alignment for GI: 254780132 and conserved domain: TIGR03574
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=98.16 E-value=1.3e-05 Score=54.92 Aligned_cols=148 Identities=20% Similarity=0.286 Sum_probs=77.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCC--CEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEEEE
Q ss_conf 999987999998999999985189--817998602788898833464201001455422102781876666128704544
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSE--YLVMPVGVTTRRPRVDEKQYIDYRFISQSQFKGWKHTGLFIETTKVRDEYYGYL 81 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~--~~~~~v~~TTR~~R~~E~~g~dY~Fvs~~~F~~~i~~~~FiE~~~~~g~~YGts 81 (186)
T Consensus 1 Livl~GlP~SGKSt~a~~L~~~l~~~~~~~i~~-~~d~~~-------~~~~~~~~~~Ek~~---------------r~~~ 57 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELSKKLSEKNIDNIIL-GTDLIR-------ESFPVWKEKYEEFI---------------RDST 57 (249)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE-CCCCCH-------HHHHHCCHHHHHHH---------------HHHH
T ss_conf 978967899989999999999999829965996-552002-------12000336779998---------------9999
Q ss_pred CCCHHHHHHHCCCCCCCCCCC---HHH----HHHHCCCCCEEEEHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH-H--
Q ss_conf 220023343102420025420---002----444205432000000232189999876201454489999999986-5--
Q gi|254780132|r 82 KEDINNPMEHGYDILLILTHQ---GLA----PLKKLYEDQVTSIFIAPPSEAELIQRRIKRREDIPFNLDPDLFGK-N-- 151 (186)
Q Consensus 82 ~~~i~~~~~~g~~~il~id~~---G~~----~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~~e~~~~i~~r~~~~-~-- 151 (186)
T Consensus 58 ~~~v~~~l~~~~~vI~D~-~nYiKg~RYEL~clAk~~~t~~c~I~~~~p-~e~c~~~N~~R~~~~~~e~i~~m~~r~E~P 135 (249)
T TIGR03574 58 LYLIKTALKNKYSVIVDD-TNYYNSKRRDLINIAKEYNKNYIIIYLKAP-LDTLLRRNIERGEKIPNEVIKDMYEKFDEP 135 (249)
T ss_pred HHHHHHHHCCCCEEEECC-CCHHHHHHHHHHHHHHHCCCCEEEEEECCC-HHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999843376699727-327889999999999984998699997399-999999876068999999999999970799
Q ss_pred ------HCCCEEEECC---CHHHHHHHHHHHHHHHHH
Q ss_conf ------3598899939---789999999999999973
Q gi|254780132|r 152 ------HSYSFTIVNN---HLPTACRQVGLIREFVKR 179 (186)
Q Consensus 152 ------~~fD~iIiNd---dle~a~~~l~~Iie~l~~ 179 (186)
T Consensus 136 ~~~nrWdsplf~i~~~~~~~~~~i~~~---l~e~~~~ 169 (249)
T TIGR03574 136 GTKYSWDLPDITIDTTKKIDYNEILEE---ILEISEN 169 (249)
T ss_pred CCCCCCCCCCEEECCCCCCCHHHHHHH---HHHHHHC
T ss_conf 989865578168428988899999999---9998514