HHsearch alignment for GI: 254780132 and conserved domain: cd02026
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. This enzyme catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=97.80 E-value=8.2e-05 Score=50.01 Aligned_cols=130 Identities=18% Similarity=0.281 Sum_probs=64.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCC-EEEEEEE---C--CCCCCCCCCCCCCHHHCCHHH--HH------HHHCCCEEEE
Q ss_conf 9999879999989999999851898-1799860---2--788898833464201001455--42------2102781876
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEY-LVMPVGV---T--TRRPRVDEKQYIDYRFISQSQ--FK------GWKHTGLFIE 69 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~-~~~~v~~---T--TR~~R~~E~~g~dY~Fvs~~~--F~------~~i~~~~FiE 69 (186)
T Consensus 1 IIgVaG~SGSGKTTv~~~i~~ifg~~~v~vI~~D~Yhr~dr~~r~~--~~~t--~~~P~And~dll~~~l~~Lk~Gk~i~ 76 (273)
T cd02026 1 IIGVAGDSGCGKSTFLRRLTSLFGSDLVTVICLDDYHSLDRKGRKE--TGIT--ALDPRANNFDLMYEQLKALKEGQAIE 76 (273)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH--HCCC--CCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9899788878699999999998584876999657778899899987--1877--68975234999999999998599534
Q ss_pred EEEECCCEEEEECCCHHHHHHHCCCCCCCCCCCHHH-----HHHHCCCCCEEEEHCCCCCHHHHHHHHH----HCCCCCH
Q ss_conf 666128704544220023343102420025420002-----4442054320000002321899998762----0145448
Q gi|254780132|r 70 TTKVRDEYYGYLKEDINNPMEHGYDILLILTHQGLA-----PLKKLYEDQVTSIFIAPPSEAELIQRRI----KRREDIP 140 (186)
Q Consensus 70 ~~~~~g~~YGts~~~i~~~~~~g~~~il~id~~G~~-----~lk~~~~~~~~~IfI~pps~~~L~~RL~----~R~~e~~ 140 (186)
T Consensus 77 ~PvY-dh~tg~~-~~~e~-i~-p~diII---~EGLh~l~~~~lrdl~D---LkIfVD~d~dlr~~rKI~RD~~ERGyS~E 146 (273)
T cd02026 77 KPIY-NHVTGLI-DPPEL-IK-PTKIVV---IEGLHPLYDERVRELLD---FSVYLDISDEVKFAWKIQRDMAERGHSLE 146 (273)
T ss_pred CCCC-CCCCCCC-CCCEE-EC-CCCEEE---EECEECCCCHHHHHHHC---EEEEECCCHHHHHHHHHHHHHHHHCCCHH
T ss_conf 3222-1458965-77565-06-874799---92200026688986607---46885687647999987766766488999
Q ss_pred H---HHHHHH
Q ss_conf 9---999999
Q gi|254780132|r 141 F---NLDPDL 147 (186)
Q Consensus 141 ~---~i~~r~ 147 (186)
T Consensus 147 ~V~~~I~rR~ 156 (273)
T cd02026 147 DVLASIEARK 156 (273)
T ss_pred HHHHHHHHHH
T ss_conf 9999998604