HHsearch alignment for GI: 254780132 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=96.86 E-value=0.0017 Score=42.08 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=21.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7199998799999899999998518
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNS 26 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~ 26 (186)
T Consensus 26 ge~~~l~G~NGsGKTTl~~~l~G~~ 50 (144)
T cd03221 26 GDRIGLVGRNGAGKSTLLKLIAGEL 50 (144)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999899984999999984898