HHsearch alignment for GI: 254780132 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.55 E-value=0.0034 Score=40.22 Aligned_cols=25 Identities=36% Similarity=0.554 Sum_probs=22.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7199998799999899999998518
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNS 26 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~ 26 (186)
T Consensus 26 Gei~gl~G~NGaGKSTLl~~i~Gl~ 50 (173)
T cd03230 26 GEIYGLLGPNGAGKTTLIKIILGLL 50 (173)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9399998789979999999997685