HHsearch alignment for GI: 254780132 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.33 E-value=0.00018 Score=48.01 Aligned_cols=24 Identities=25% Similarity=0.556 Sum_probs=21.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 719999879999989999999851
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLN 25 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~ 25 (186)
T Consensus 25 Ge~~~iiGpSGsGKSTLlr~i~Gl 48 (235)
T cd03299 25 GDYFVILGPTGSGKSVLLETIAGF 48 (235)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 989999999963599999999749