HHsearch alignment for GI: 254780132 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=98.35 E-value=1.1e-06 Score=61.44 Aligned_cols=133 Identities=21% Similarity=0.183 Sum_probs=65.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEE--E-E----EECC-C---CC--CC-CCCCCCCHHHCCHHHH--------HHH
Q ss_conf 9999879999989999999851898179--9-8----6027-8---88--98-8334642010014554--------221
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEYLVM--P-V----GVTT-R---RP--RV-DEKQYIDYRFISQSQF--------KGW 61 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~~~~--~-v----~~TT-R---~~--R~-~E~~g~dY~Fvs~~~F--------~~~ 61 (186)
T Consensus 1 iIgIaG~SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l~~ 80 (196)
T pfam00485 1 IIGVAGSSGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQFKE 80 (196)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98998998571999999999996605877641243179860410244375767651457889789662359999999999
Q ss_pred HCCCEEEEEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHH-----HHHCCCCCEEEEHCCCCCHHHHHHHHH---
Q ss_conf 027818766661287045442200233431024200254200024-----442054320000002321899998762---
Q gi|254780132|r 62 KHTGLFIETTKVRDEYYGYLKEDINNPMEHGYDILLILTHQGLAP-----LKKLYEDQVTSIFIAPPSEAELIQRRI--- 133 (186)
Q Consensus 62 i~~~~FiE~~~~~g~~YGts~~~i~~~~~~g~~~il~id~~G~~~-----lk~~~~~~~~~IfI~pps~~~L~~RL~--- 133 (186)
T Consensus 81 Lk~g~~i~~P~Yd-f~~~~r~~~-~~~i~p~~viIv----EGi~~l~~~~ir~l~D---~kIfid~~~d~rl~RRi~RD~ 151 (196)
T pfam00485 81 LKEGGSGDKPIYN-HVTGEADPW-PELIEGADILFI----EGLHGLYDERVAQLLD---LKIYVDPDIDLELIQKIQRDM 151 (196)
T ss_pred HHCCCCEEEEEEE-CCCCCCCCC-CEECCCCCEEEE----ECHHHCCCHHHHHHHC---EEEEEECCCCHHHHHHHHHCH
T ss_conf 7089945765675-134533677-366178856999----4333303277887638---479972680199999987345
Q ss_pred -HCCCCCHHHHHH
Q ss_conf -014544899999
Q gi|254780132|r 134 -KRREDIPFNLDP 145 (186)
Q Consensus 134 -~R~~e~~~~i~~ 145 (186)
T Consensus 152 ~eRgrs~~~v~~q 164 (196)
T pfam00485 152 AERGHSLEGVTDS 164 (196)
T ss_pred HHHCCCHHHHHHH
T ss_conf 7519999999999