HHsearch alignment for GI: 254780134 and conserved domain: PRK09870

>PRK09870 tyrosine recombinase; Provisional.
Probab=99.97  E-value=3.4e-31  Score=221.33  Aligned_cols=169  Identities=17%  Similarity=0.219  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHCCC---CHHHHHHHHHHHCCCCCCCCCCCCCCEEE--EECCCCCCCCCHHHHHHCC
Q ss_conf             643244442116523445666640378---08999989898618873100256640144--3023321133102433112
Q gi|254780134|r  163 RPKRKTEGIRPWTKEDMQQFKSFWSEG---SQPRLAFEFLLYSGLRCSDSCRAGVQHLQ--NNIFSIKTQKTGTIITVEL  237 (348)
Q Consensus       163 ~~~~~~~~~~~~t~~ei~~~~~~~~~~---~~~~~~~~l~~~TG~R~~Ei~~L~~~did--~~~i~~~~~Kt~~~~~vpl  237 (348)
T Consensus         2 k~K~~~k~~~~LT~~Ev~~lL~~~~~~~~~~Rd~aii~ll~~tGlRvsEl~~L~~~DId~~~~~i~i~~~k~g~~~~~pl   81 (200)
T PRK09870          2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPL   81 (200)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCEEEEEECCCCCEEEEEC
T ss_conf             98778888998899999999827799937589999999999968689999769598718779979999767897578876


Q ss_pred             HHHHHHHHHHH-------C-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf             16899999642-------0-1332211222457758778999999999983889--981402699999999848998899
Q gi|254780134|r  238 PDGFMKLLAMT-------P-IGKETFFINNDKQKMNATQFSIWFKAKATKAGVN--KSAHGVRKFSATISADAGATAHEL  307 (348)
Q Consensus       238 ~~~l~~~l~~~-------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~--~~~H~lRht~at~l~~~G~~~~~i  307 (348)
T Consensus        82 ~~~~~~~l~~~l~~r~~~~~~~~~~lF~s~~G~~ls~~~i~~~~~~~~~~agi~~~v~pH~LRHt~At~Ll~~G~di~~I  161 (200)
T PRK09870         82 LNKEIQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLI  161 (200)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
T ss_conf             79999999999998752458888714257999977799999999999998599977687602899999999869999999


Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             9996499989999999999899999
Q gi|254780134|r  308 MATYGWKTVDQAETYTKGADRIRLG  332 (348)
Q Consensus       308 ~~~lGHss~~~t~~Y~~~~~~~r~a  332 (348)
T Consensus       162 q~lLGHssi~TT~iYth~~-~~~l~  185 (200)
T PRK09870        162 QDYLGHRNIRHTVWYTASN-AGRFY  185 (200)
T ss_pred             HHHHCCCCHHHHHHHHHCC-HHHHH
T ss_conf             9994899866899988179-99999