HHsearch alignment for GI: 254780134 and conserved domain: PRK09870
>PRK09870 tyrosine recombinase; Provisional.
Probab=99.97 E-value=3.4e-31 Score=221.33 Aligned_cols=169 Identities=17% Similarity=0.219 Sum_probs=141.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCC---CHHHHHHHHHHHCCCCCCCCCCCCCCEEE--EECCCCCCCCCHHHHHHCC
Q ss_conf 643244442116523445666640378---08999989898618873100256640144--3023321133102433112
Q gi|254780134|r 163 RPKRKTEGIRPWTKEDMQQFKSFWSEG---SQPRLAFEFLLYSGLRCSDSCRAGVQHLQ--NNIFSIKTQKTGTIITVEL 237 (348)
Q Consensus 163 ~~~~~~~~~~~~t~~ei~~~~~~~~~~---~~~~~~~~l~~~TG~R~~Ei~~L~~~did--~~~i~~~~~Kt~~~~~vpl 237 (348)
T Consensus 2 k~K~~~k~~~~LT~~Ev~~lL~~~~~~~~~~Rd~aii~ll~~tGlRvsEl~~L~~~DId~~~~~i~i~~~k~g~~~~~pl 81 (200)
T PRK09870 2 KNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPL 81 (200)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 98778888998899999999827799937589999999999968689999769598718779979999767897578876
Q ss_pred HHHHHHHHHHH-------C-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 16899999642-------0-1332211222457758778999999999983889--981402699999999848998899
Q gi|254780134|r 238 PDGFMKLLAMT-------P-IGKETFFINNDKQKMNATQFSIWFKAKATKAGVN--KSAHGVRKFSATISADAGATAHEL 307 (348)
Q Consensus 238 ~~~l~~~l~~~-------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~--~~~H~lRht~at~l~~~G~~~~~i 307 (348)
T Consensus 82 ~~~~~~~l~~~l~~r~~~~~~~~~~lF~s~~G~~ls~~~i~~~~~~~~~~agi~~~v~pH~LRHt~At~Ll~~G~di~~I 161 (200)
T PRK09870 82 LNKEIQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLI 161 (200)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHH
T ss_conf 79999999999998752458888714257999977799999999999998599977687602899999999869999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9996499989999999999899999
Q gi|254780134|r 308 MATYGWKTVDQAETYTKGADRIRLG 332 (348)
Q Consensus 308 ~~~lGHss~~~t~~Y~~~~~~~r~a 332 (348)
T Consensus 162 q~lLGHssi~TT~iYth~~-~~~l~ 185 (200)
T PRK09870 162 QDYLGHRNIRHTVWYTASN-AGRFY 185 (200)
T ss_pred HHHHCCCCHHHHHHHHHCC-HHHHH
T ss_conf 9994899866899988179-99999