HHsearch alignment of GI: 254780134 and MMDB domain: 1a0p_A_1-100
>1a0p_A (A:1-100) Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli}
Probab=99.15 E-value=1.9e-10 Score=85.98 Aligned_cols=92 Identities=13% Similarity=0.224 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHC--CCCHHHCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHH
Q ss_conf 89999999983554-35697889999999999999956--99958969999999887515---99789999999999999
Q gi|254780134|r 71 LKWLISEYRKSAHW-GSLAVNSRISFESYFDQIIRKSG--DFDYRKITTKHIRSGVESRK---HTPSSAIQFLTSMRVLF 144 (348)
Q Consensus 71 l~~l~~~y~~~~~~-~~l~~~T~~~~~~~~~~~~~~~g--~~~l~~it~~~i~~~~~~~~---~~~~t~n~~~~~l~~~~ 144 (348)
+.++++.|+..... ++++++|+..|...+++|...++ ..++.+|+..+|..|+..+. .++.|+|+.++.|+.+|
T Consensus 2 l~~~~~~fl~~l~~~~~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~i~~~~i~~~~~~l~~~~~s~~Ti~~~l~~lr~f~ 81 (100)
T 1a0p_A 2 DLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLF 81 (100)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTSCCTTTCCHHHHHHHHHSCC-------CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 87999999999999869179999999999999999998749992669999999999997640023321256777765411
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 644552001056651034
Q gi|254780134|r 145 KWAVRQEYVAINPCLSVE 162 (348)
Q Consensus 145 ~~a~~~~~i~~NP~~~v~ 162 (348)
+||+++|+++.||+.+|+
T Consensus 82 ~~~~~~~~i~~nP~~~i~ 99 (100)
T 1a0p_A 82 QYLYREKFREDDPSAHLA 99 (100)
T ss_dssp HHHHHTTSSSSCTTSCC-
T ss_pred HHHHHCCCCCCHHHHCCC
T ss_conf 333212432210110025