HHsearch alignment of GI: 254780134 and MMDB domain: 1a0p_A_101-290
>1a0p_A (A:101-290) Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli}
Probab=99.85 E-value=2.8e-21 Score=156.39 Aligned_cols=164 Identities=15% Similarity=0.136 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCC----HHHHHHHHHHHCCCCCCCCCCCCCCEEEEE--CCCCCCCCCHHHHHHCC
Q ss_conf 432444421165234456666403780----899998989861887310025664014430--23321133102433112
Q gi|254780134|r 164 PKRKTEGIRPWTKEDMQQFKSFWSEGS----QPRLAFEFLLYSGLRCSDSCRAGVQHLQNN--IFSIKTQKTGTIITVEL 237 (348)
Q Consensus 164 ~~~~~~~~~~~t~~ei~~~~~~~~~~~----~~~~~~~l~~~TG~R~~Ei~~L~~~did~~--~i~~~~~Kt~~~~~vpl 237 (348)
||.+.....++|+||+.+|+++..... +.+++|.++++||||.||+++|+|+||+.+ .+.+...++......+.
T Consensus 1 PK~~~~~~~~lt~eel~~ll~~~~~~~~~~~r~~~i~~l~~~TGlR~~Ei~~L~~~di~~~~~~i~i~~~~~~~~~~~~~ 80 (190)
T 1a0p_A 1 PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLG 80 (190)
T ss_dssp --------CCCCHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHCCCHHHHTTCBGGGEETTTTEEEEECSSSCEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCEEC
T ss_conf 64110232222222222222222101133689999999865641204554058499905423289966889820101001
Q ss_pred HHHHHHHHHH---H------CCCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHCCC-CCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf 1689999964---2------013322112224577587789999--9999998388-99814026999999998489988
Q gi|254780134|r 238 PDGFMKLLAM---T------PIGKETFFINNDKQKMNATQFSIW--FKAKATKAGV-NKSAHGVRKFSATISADAGATAH 305 (348)
Q Consensus 238 ~~~l~~~l~~---~------~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~agi-~~~~H~lRht~at~l~~~G~~~~ 305 (348)
.......... . .......+......+......... +.......+. ..++|++||||+|.+.++|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~Rht~~t~~~~~~~~~~ 160 (190)
T 1a0p_A 81 EEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLR 160 (190)
T ss_dssp HHHHHHHHHHHHHTHHHHHTTCCCCBSSBCTTSSBCCHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHCSSCG
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 11003567777652021122345655443222232111789999999999946899987765188999999998789999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 9999964999899999999998
Q gi|254780134|r 306 ELMATYGWKTVDQAETYTKGAD 327 (348)
Q Consensus 306 ~i~~~lGHss~~~t~~Y~~~~~ 327 (348)
.||.+|||+|+.||++|++..+
T Consensus 161 ~i~~~lGH~s~~~T~~Y~~~~~ 182 (190)
T 1a0p_A 161 VVQMLLGHSDLSTTQIYTHVAT 182 (190)
T ss_dssp GGSSCC--CCCCHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCH
T ss_conf 9998818998899999977899