HHsearch alignment of GI: 254780134 and MMDB domain: 1a0p_A_101-290

>1a0p_A (A:101-290) Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli}
Probab=99.85  E-value=2.8e-21  Score=156.39  Aligned_cols=164  Identities=15%  Similarity=0.136  Sum_probs=106.4

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCC----HHHHHHHHHHHCCCCCCCCCCCCCCEEEEE--CCCCCCCCCHHHHHHCC
Q ss_conf             432444421165234456666403780----899998989861887310025664014430--23321133102433112
Q gi|254780134|r  164 PKRKTEGIRPWTKEDMQQFKSFWSEGS----QPRLAFEFLLYSGLRCSDSCRAGVQHLQNN--IFSIKTQKTGTIITVEL  237 (348)
Q Consensus       164 ~~~~~~~~~~~t~~ei~~~~~~~~~~~----~~~~~~~l~~~TG~R~~Ei~~L~~~did~~--~i~~~~~Kt~~~~~vpl  237 (348)
                      ||.+.....++|+||+.+|+++.....    +.+++|.++++||||.||+++|+|+||+.+  .+.+...++......+.
T Consensus         1 PK~~~~~~~~lt~eel~~ll~~~~~~~~~~~r~~~i~~l~~~TGlR~~Ei~~L~~~di~~~~~~i~i~~~~~~~~~~~~~   80 (190)
T 1a0p_A            1 PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLG   80 (190)
T ss_dssp             --------CCCCHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHCCCHHHHTTCBGGGEETTTTEEEEECSSSCEEEEECC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCEEC
T ss_conf             64110232222222222222222101133689999999865641204554058499905423289966889820101001


Q ss_pred             HHHHHHHHHH---H------CCCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHCCC-CCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             1689999964---2------013322112224577587789999--9999998388-99814026999999998489988
Q gi|254780134|r  238 PDGFMKLLAM---T------PIGKETFFINNDKQKMNATQFSIW--FKAKATKAGV-NKSAHGVRKFSATISADAGATAH  305 (348)
Q Consensus       238 ~~~l~~~l~~---~------~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~agi-~~~~H~lRht~at~l~~~G~~~~  305 (348)
                      ..........   .      .......+......+.........  +.......+. ..++|++||||+|.+.++|+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~Rht~~t~~~~~~~~~~  160 (190)
T 1a0p_A           81 EEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLR  160 (190)
T ss_dssp             HHHHHHHHHHHHHTHHHHHTTCCCCBSSBCTTSSBCCHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHCSSCG
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf             11003567777652021122345655443222232111789999999999946899987765188999999998789999


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             9999964999899999999998
Q gi|254780134|r  306 ELMATYGWKTVDQAETYTKGAD  327 (348)
Q Consensus       306 ~i~~~lGHss~~~t~~Y~~~~~  327 (348)
                      .||.+|||+|+.||++|++..+
T Consensus       161 ~i~~~lGH~s~~~T~~Y~~~~~  182 (190)
T 1a0p_A          161 VVQMLLGHSDLSTTQIYTHVAT  182 (190)
T ss_dssp             GGSSCC--CCCCHHHHHHHHHH
T ss_pred             HHHHHHCCCCHHHHHHHHCCCH
T ss_conf             9998818998899999977899