HHsearch alignment of GI: 254780134 and MMDB domain: 1z19_A_94-283
>1z19_A (A:94-283) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 2.80A {Enterobacteria phage lambda} PDB: 1p7d_A*
Probab=99.83 E-value=6.6e-20 Score=147.52 Aligned_cols=165 Identities=13% Similarity=0.119 Sum_probs=117.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCEEEE--ECCCCCCCCCHHHHHH--C
Q ss_conf 464324444211652344566664037-8089999898986188731002566401443--0233211331024331--1
Q gi|254780134|r 162 ERPKRKTEGIRPWTKEDMQQFKSFWSE-GSQPRLAFEFLLYSGLRCSDSCRAGVQHLQN--NIFSIKTQKTGTIITV--E 236 (348)
Q Consensus 162 ~~~~~~~~~~~~~t~~ei~~~~~~~~~-~~~~~~~~~l~~~TG~R~~Ei~~L~~~did~--~~i~~~~~Kt~~~~~v--p 236 (348)
.+|+.......+++.+|+.+|++.+.. +...++++.|+++||||.||+++|+|+|||. ..+.+...+++....+ +
T Consensus 2 ~k~k~~~~~~~~lt~ee~~~l~~~~~~~~~~~~~~~~l~~~tG~R~~El~~l~~~di~~~~~~~~i~~~~~~~~~~~~~~ 81 (190)
T 1z19_A 2 TRAAKSKVRRSRLTADEYLKIYQAAESSPCWLRLAXELAVVTGQRVGDLCEXKWSDIVDGYLYVEQSKTGVKIAIPTALH 81 (190)
T ss_dssp SCCCCCCCCCCCCCHHHHHHHHHHGGGSCHHHHHHHHHHHHSCCCHHHHTTCBGGGEETTEEEEECTTTCCEEEEETTCE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEECCCCC
T ss_conf 11222222223330366764202210022788999999998076533445454202312420000146785133113630
Q ss_pred CHH----HHHHH-HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHCCCCHHHH
Q ss_conf 216----89999-9642013322112224577587789999999999838----89981402699999999848998899
Q gi|254780134|r 237 LPD----GFMKL-LAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAG----VNKSAHGVRKFSATISADAGATAHEL 307 (348)
Q Consensus 237 l~~----~l~~~-l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ag----i~~~~H~lRht~at~l~~~G~~~~~i 307 (348)
... ..... ..........+|....|.+.........+........ .....|.+||++||.|+++|+++..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~a~~l~~~g~~~~~i 161 (190)
T 1z19_A 82 IDALGISXKETLDKCKEILGGETIIASTRREPLSSGTVSRYFXRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFA 161 (190)
T ss_dssp ETTTTEEHHHHHHHHHHHHCSSBSSCCTTSSCCCHHHHHHHHHHHHHHTTCCCSSSCCCGGGHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
T ss_conf 14678888888876402577642012111211002677789999999847776789997384999999999869899999
Q ss_pred HHHHCCCCHHHHHH-HHHHH
Q ss_conf 99964999899999-99999
Q gi|254780134|r 308 MATYGWKTVDQAET-YTKGA 326 (348)
Q Consensus 308 ~~~lGHss~~~t~~-Y~~~~ 326 (348)
+++|||+|.+||++ |.+..
T Consensus 162 ~~~lGH~~~~~T~~~Y~~~~ 181 (190)
T 1z19_A 162 QHLLGHKSDTXASQXRDDRG 181 (190)
T ss_dssp HHHHTCSSSCC---------
T ss_pred HHHHCCCCHHHHHHHHCCCH
T ss_conf 99948998899999852748