HHsearch alignment of GI: 254780134 and MMDB domain: 2a3v_A_1-94
>2a3v_A (A:1-94) Site-specific recombinase INTI4; protein-DNA complex, recombination; HET: DNA; 2.80A {Vibrio cholerae o1 biovar eltor str}
Probab=99.20 E-value=8.1e-11 Score=88.40 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999983554356978899999999999999569995896999999988751----599789999999999999644
Q gi|254780134|r 72 KWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESR----KHTPSSAIQFLTSMRVLFKWA 147 (348)
Q Consensus 72 ~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~----~~~~~t~n~~~~~l~~~~~~a 147 (348)
.++++.|+.....++++++|+..|+..++.|...+|+.++.+|+..+|..|+..+ +.++.|+|..++.|++||+|+
T Consensus 3 ~~~i~~~l~~l~~~~~s~~Ti~~y~~~l~~f~~~l~~~~~~~i~~~~i~~~~~~l~~~~~~s~~T~~~~l~~lr~f~~~~ 82 (94)
T 2a3v_A 3 SQFLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGKVATKTQSLALNSLSFLYKEI 82 (94)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSCCGGGCCHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999999999984989999999999999999997107944499999999999999838988326999999998887510
Q ss_pred HHHHHHHHHHHH
Q ss_conf 552001056651
Q gi|254780134|r 148 VRQEYVAINPCL 159 (348)
Q Consensus 148 ~~~~~i~~NP~~ 159 (348)
++.|+++.||++
T Consensus 83 ~~~~~i~~nP~~ 94 (94)
T 2a3v_A 83 LKTPLSLEIRFQ 94 (94)
T ss_dssp SSCCCCTTCCCC
T ss_pred HCCCCCCCCCCH
T ss_conf 001245432200