HHsearch alignment of GI: 254780134 and MMDB domain: 2key_A_

>2key_A (A:) Putative phage integrase; protein structure, PSI, NESG, structural genomics, unknown function, protein structure initiative; NMR {Bacteroides fragilis nctc 9343}
Probab=99.51  E-value=6.2e-14  Score=108.68  Aligned_cols=104  Identities=12%  Similarity=0.204  Sum_probs=93.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH----CCCHHHHHHHHHHH
Q ss_conf             23448789999999983554356978899999999999999569995896999999988751----59978999999999
Q gi|254780134|r   65 RKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESR----KHTPSSAIQFLTSM  140 (348)
Q Consensus        65 ~~~~~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~----~~~~~t~n~~~~~l  140 (348)
                      .....||.++++.|++..+ .+++++|...|+..+++|.+.+|+.++.+|++.++++|++.+    +.+++|+|.+++.|
T Consensus         4 ~~~~~t~~~~~~~~l~~~~-~~~~~~T~~~y~~~l~~~~~~~g~~~l~~i~~~~i~~~~~~l~~~~~~s~~t~~~~~~~l   82 (112)
T 2key_A            4 PSDFKSFHDFVASYMKTYS-RRLEIGTFRHHKSCMRKFKEYCEGLQFHELTEDFLRDYLIYMKKTLCNADSTAQRNLSTI   82 (112)
T ss_dssp             TTCCCSHHHHHHHHTHHHH-TTSCHHHHHHHHHHHHHTTTSCSCCCTTTCCHHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             5488899999999999998-369998999999999999876125997984988899999999887741806889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99996445520010566510346432444
Q gi|254780134|r  141 RVLFKWAVRQEYVAINPCLSVERPKRKTE  169 (348)
Q Consensus       141 ~~~~~~a~~~~~i~~NP~~~v~~~~~~~~  169 (348)
                      +.+|+||++.|++..||+.+|+.|+.+.+
T Consensus        83 ~~~~~~a~~~~~i~~nP~~~i~~pk~~kr  111 (112)
T 2key_A           83 KIYVSAAIKKGYMENDPFKDFGLEHHHHH  111 (112)
T ss_dssp             HHHHHHHHHTTSCCSCHHHHHTCCCCCSC
T ss_pred             HHHHHHHHHCCCCCCCCCCCEEEEECCCC
T ss_conf             99999999888942187201053324667