HHsearch alignment of GI: 254780134 and MMDB domain: 2key_A_
>2key_A (A:) Putative phage integrase; protein structure, PSI, NESG, structural genomics, unknown function, protein structure initiative; NMR {Bacteroides fragilis nctc 9343}
Probab=99.51 E-value=6.2e-14 Score=108.68 Aligned_cols=104 Identities=12% Similarity=0.204 Sum_probs=93.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH----CCCHHHHHHHHHHH
Q ss_conf 23448789999999983554356978899999999999999569995896999999988751----59978999999999
Q gi|254780134|r 65 RKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESR----KHTPSSAIQFLTSM 140 (348)
Q Consensus 65 ~~~~~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~----~~~~~t~n~~~~~l 140 (348)
.....||.++++.|++..+ .+++++|...|+..+++|.+.+|+.++.+|++.++++|++.+ +.+++|+|.+++.|
T Consensus 4 ~~~~~t~~~~~~~~l~~~~-~~~~~~T~~~y~~~l~~~~~~~g~~~l~~i~~~~i~~~~~~l~~~~~~s~~t~~~~~~~l 82 (112)
T 2key_A 4 PSDFKSFHDFVASYMKTYS-RRLEIGTFRHHKSCMRKFKEYCEGLQFHELTEDFLRDYLIYMKKTLCNADSTAQRNLSTI 82 (112)
T ss_dssp TTCCCSHHHHHHHHTHHHH-TTSCHHHHHHHHHHHHHTTTSCSCCCTTTCCHHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 5488899999999999998-369998999999999999876125997984988899999999887741806889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99996445520010566510346432444
Q gi|254780134|r 141 RVLFKWAVRQEYVAINPCLSVERPKRKTE 169 (348)
Q Consensus 141 ~~~~~~a~~~~~i~~NP~~~v~~~~~~~~ 169 (348)
+.+|+||++.|++..||+.+|+.|+.+.+
T Consensus 83 ~~~~~~a~~~~~i~~nP~~~i~~pk~~kr 111 (112)
T 2key_A 83 KIYVSAAIKKGYMENDPFKDFGLEHHHHH 111 (112)
T ss_dssp HHHHHHHHHTTSCCSCHHHHHTCCCCCSC
T ss_pred HHHHHHHHHCCCCCCCCCCCEEEEECCCC
T ss_conf 99999999888942187201053324667