HHsearch alignment of GI: 254780134 and MMDB domain: 2kiw_A_

>2kiw_A (A:) INT protein; alpha, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Staphylococcus haemolyticus JCSC1435}
Probab=99.62  E-value=4.2e-15  Score=116.26  Aligned_cols=109  Identities=17%  Similarity=0.200  Sum_probs=100.8

Q ss_pred             CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHH
Q ss_conf             7899999999835543569788999999999999995699958969999999887515--99789999999999999644
Q gi|254780134|r   70 TLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESRK--HTPSSAIQFLTSMRVLFKWA  147 (348)
Q Consensus        70 Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~~--~~~~t~n~~~~~l~~~~~~a  147 (348)
                      ||+++++.|+...+ .+++++|+..|+..++++.+.+|+.++.+||+.++++|++.+.  .++.|+|.+++.|+.+|+||
T Consensus         1 T~~~~~~~~l~~~~-~~~s~~T~~~~~~~~~~~~~~~g~~~i~~it~~~i~~~~~~l~~~~s~~t~~~~~~~l~~~~~~a   79 (111)
T 2kiw_A            1 TFKQVADDWLKQYA-NDVKVSSVRAREKAIQHAIERFNTKPIQTIKKHDYQRFVDDISAQYSKNYVDSIVASTNMIFKYA   79 (111)
T ss_dssp             CHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHHHHHTTSSCGGGCCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999976-11899999999999999999987892999359999999998864403999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf             55200105665103464324444211652344
Q gi|254780134|r  148 VRQEYVAINPCLSVERPKRKTEGIRPWTKEDM  179 (348)
Q Consensus       148 ~~~~~i~~NP~~~v~~~~~~~~~~~~~t~~ei  179 (348)
                      +++|++..||+..|+.++......++++.+|.
T Consensus        80 ~~~~~i~~nP~~~i~~~~~~~~~~~~ls~~Eq  111 (111)
T 2kiw_A           80 YDTRLIKAMPSEGIKRPKKKVSVELEHHHHHH  111 (111)
T ss_dssp             HHTTSCSCCTTTTCCCCSCCCCCCCSSCCCCC
T ss_pred             HHCCCCCCCCHHHCCCCCCCCCHHHHCCCCCC
T ss_conf             99789231818538578888778877112359