HHsearch results for GI: 254780134 and protein with PDBid: 1xo0_A
>1xo0_A Recombinase CRE; CRE recombinase, holliday junction, recombination,complex (recombinase/DNA), hydrolase, ligase/DNA complex; 2.00A {Enterobacteria phage P1} SCOP: a.60.9.1 d.163.1.1 PDB: 3crx_A* 1kbu_A 1ma7_A 1q3u_A* 1q3v_A* 3mgv_A* 1ouq_A* 1nzb_A* 2crx_A* 1xns_A 5crx_A* 1f44_A* 2hof_A 2hoi_A 4crx_A* 1drg_A 3c29_A* 3c28_A 1crx_A* 1pvr_A ...
Probab=99.95 E-value=9.8e-27 Score=190.93 Aligned_cols=256 Identities=15% Similarity=0.148 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC--CCCHHHCCHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHH
Q ss_conf 8999999998355435697889999999999999956--9995896999999988751---5997899999999999996
Q gi|254780134|r 71 LKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSG--DFDYRKITTKHIRSGVESR---KHTPSSAIQFLTSMRVLFK 145 (348)
Q Consensus 71 l~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g--~~~l~~it~~~i~~~~~~~---~~~~~t~n~~~~~l~~~~~ 145 (348)
+.+-+.+|++.. +.++++|+..|...++.|..++. +.++.+|++.+|.+|++.+ +.+++|+|.+++.|+.+|+
T Consensus 4 ~~~~~~~~~~~~--~~~s~~T~~~y~~~~~~f~~f~~~~~~~~~~it~~~v~~y~~~l~~~g~s~~Ti~~~l~~l~~~~~ 81 (324)
T 1xo0_A 4 VRKNLMDMFRDR--QAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHR 81 (324)
T ss_dssp HHHHHHHHHHTG--GGSCHHHHHHHHHHHHHHHHHHHHHTCCCSSCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999986--485999999999999999999997398956799999999999998779998999999999887789
Q ss_pred HHHHHHHHHHHHHHCCCCC--------CCCCCCCCCCCHHHHHHHHHHHCCC-----CHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 4455200105665103464--------3244442116523445666640378-----08999989898618873100256
Q gi|254780134|r 146 WAVRQEYVAINPCLSVERP--------KRKTEGIRPWTKEDMQQFKSFWSEG-----SQPRLAFEFLLYSGLRCSDSCRA 212 (348)
Q Consensus 146 ~a~~~~~i~~NP~~~v~~~--------~~~~~~~~~~t~~ei~~~~~~~~~~-----~~~~~~~~l~~~TG~R~~Ei~~L 212 (348)
||...+.+..+|....... ........+++.++...+....... .+.+.++.+++.+|+|.+|++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~r~~e~~~~ 161 (324)
T 1xo0_A 82 RSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLKIAEIARI 161 (324)
T ss_dssp HHTSCCGGGSHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCCCHHHHHHC
T ss_pred HHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHC
T ss_conf 98742644463365530100001455332333577688999999998664534077899999999876555728988641
Q ss_pred CCCEEEEE-----CCCCCCCCC---HHHHHHCCHHHHHHHHHHHCC----------------CCCCCCCCCCCCCCCHHH
Q ss_conf 64014430-----233211331---024331121689999964201----------------332211222457758778
Q gi|254780134|r 213 GVQHLQNN-----IFSIKTQKT---GTIITVELPDGFMKLLAMTPI----------------GKETFFINNDKQKMNATQ 268 (348)
Q Consensus 213 ~~~did~~-----~i~~~~~Kt---~~~~~vpl~~~l~~~l~~~~~----------------~~~~~~~~~~g~~~~~~~ 268 (348)
.|.|++.. .+.....|+ +..+.+|+.+.+.+++..... ....++.+..+.++...+
T Consensus 162 ~~~d~~~~~~~~~~~~~~~~k~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 1xo0_A 162 RVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRA 241 (324)
T ss_dssp BGGGEEEEETTEEEEEECCCCSSSSCSCEEEEECHHHHHHHHHHHHHHCGGGSTTSBSSCEECTTSCEECCSSCCCCHHH
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCH
T ss_conf 12100015676300012344333236630220047799999999986022345432001014667665664456666402
Q ss_pred HHHHHHH---HHHH----CCC---CCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 9999999---9998----388---9981402699999999848998899999649998999999999989
Q gi|254780134|r 269 FSIWFKA---KATK----AGV---NKSAHGVRKFSATISADAGATAHELMATYGWKTVDQAETYTKGADR 328 (348)
Q Consensus 269 ~~~~~~~---~~~~----agi---~~~~H~lRht~at~l~~~G~~~~~i~~~lGHss~~~t~~Y~~~~~~ 328 (348)
+...+.. .+.. +|+ ..++|+|||||||.|+++|+++.+||.+|||+|++||++|.+..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~lRHt~at~l~~~G~~~~~v~~~lGH~s~~tt~~Y~~~~~~ 311 (324)
T 1xo0_A 242 LEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDS 311 (324)
T ss_dssp HHHHHHHHHHHHHCSCCCSCCSCSSCCTTHHHHHHHHHHHHTTCCHHHHHHHHTCSSSSSHHHHSTTSGG
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHH
T ss_conf 5567788889999998861788887788631999999999878999999988289988999998356468