HHsearch results for GI: 254780134 and protein with PDBid: 2kj8_A
>2kj8_A Putative prophage CPS-53 integrase; INTS, INTC, YFDB, DNA integration, DNA recombination, structural genomics, protein structure initiative; NMR {Escherichia coli k-12}
Probab=99.33 E-value=5.8e-12 Score=94.87 Aligned_cols=94 Identities=13% Similarity=0.209 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHCCCCHHHCCHHHHHHHHHHHCC--CHHHHHHHHHHHHHHH
Q ss_conf 487899999999835543569788999999999-9999956999589699999998875159--9789999999999999
Q gi|254780134|r 68 PTTLKWLISEYRKSAHWGSLAVNSRISFESYFD-QIIRKSGDFDYRKITTKHIRSGVESRKH--TPSSAIQFLTSMRVLF 144 (348)
Q Consensus 68 ~~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~-~~~~~~g~~~l~~it~~~i~~~~~~~~~--~~~t~n~~~~~l~~~~ 144 (348)
..||++++++|++..+ ..++++|...+...++ ++.|.||++++.+|++.+|..+++.+.. ++.++++.++.++.+|
T Consensus 4 ~nTF~~~a~eWle~~k-~~~~~~t~~~~~~~l~~~i~P~lG~~~i~~It~~~i~~~l~~i~~~g~~~ta~r~~~~l~~if 82 (118)
T 2kj8_A 4 NNSFSAIYKEWYEHKK-QVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVF 82 (118)
T ss_dssp TTBHHHHHHHHHHHHT-TTSCHHHHHHHHHHHHHHHHHHHTTSBTTSCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 5679999999999852-438887999999999988788848982999379999999999999599799999999999999
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 644552001056651034
Q gi|254780134|r 145 KWAVRQEYVAINPCLSVE 162 (348)
Q Consensus 145 ~~a~~~~~i~~NP~~~v~ 162 (348)
+||+..|+++.||+.+++
T Consensus 83 ~~Av~~~~i~~NP~~~i~ 100 (118)
T 2kj8_A 83 RYAIVTGRAKYNPAPDLA 100 (118)
T ss_dssp HHHHHTTSCSCCSHHHHH
T ss_pred HHHHHCCCCCCCCHHHHH
T ss_conf 999985880238278898