HHsearch results for GI: 254780134 and protein with PDBid: 2kj8_A

>2kj8_A Putative prophage CPS-53 integrase; INTS, INTC, YFDB, DNA integration, DNA recombination, structural genomics, protein structure initiative; NMR {Escherichia coli k-12}
Probab=99.33  E-value=5.8e-12  Score=94.87  Aligned_cols=94  Identities=13%  Similarity=0.209  Sum_probs=84.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHCCCCHHHCCHHHHHHHHHHHCC--CHHHHHHHHHHHHHHH
Q ss_conf             487899999999835543569788999999999-9999956999589699999998875159--9789999999999999
Q gi|254780134|r   68 PTTLKWLISEYRKSAHWGSLAVNSRISFESYFD-QIIRKSGDFDYRKITTKHIRSGVESRKH--TPSSAIQFLTSMRVLF  144 (348)
Q Consensus        68 ~~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~-~~~~~~g~~~l~~it~~~i~~~~~~~~~--~~~t~n~~~~~l~~~~  144 (348)
                      ..||++++++|++..+ ..++++|...+...++ ++.|.||++++.+|++.+|..+++.+..  ++.++++.++.++.+|
T Consensus         4 ~nTF~~~a~eWle~~k-~~~~~~t~~~~~~~l~~~i~P~lG~~~i~~It~~~i~~~l~~i~~~g~~~ta~r~~~~l~~if   82 (118)
T 2kj8_A            4 NNSFSAIYKEWYEHKK-QVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVF   82 (118)
T ss_dssp             TTBHHHHHHHHHHHHT-TTSCHHHHHHHHHHHHHHHHHHHTTSBTTSCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             5679999999999852-438887999999999988788848982999379999999999999599799999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCC
Q ss_conf             644552001056651034
Q gi|254780134|r  145 KWAVRQEYVAINPCLSVE  162 (348)
Q Consensus       145 ~~a~~~~~i~~NP~~~v~  162 (348)
                      +||+..|+++.||+.+++
T Consensus        83 ~~Av~~~~i~~NP~~~i~  100 (118)
T 2kj8_A           83 RYAIVTGRAKYNPAPDLA  100 (118)
T ss_dssp             HHHHHTTSCSCCSHHHHH
T ss_pred             HHHHHCCCCCCCCHHHHH
T ss_conf             999985880238278898