HHsearch results for GI: 254780134 and protein with PDBid: 2kkp_A
>2kkp_A Phage integrase; SAM-like domain, alpha-helical bundle, structural genomics, PSI-2, protein structure initiative; NMR {Moorella thermoacetica atcc 39073}
Probab=99.44 E-value=1.3e-13 Score=105.68 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=92.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHCCCCHHHCCHHHHHHHHHHH---CCCHHHHHHHHHHHHH
Q ss_conf 44878999999998355435697889999999999-9999569995896999999988751---5997899999999999
Q gi|254780134|r 67 KPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQ-IIRKSGDFDYRKITTKHIRSGVESR---KHTPSSAIQFLTSMRV 142 (348)
Q Consensus 67 ~~~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~-~~~~~g~~~l~~it~~~i~~~~~~~---~~~~~t~n~~~~~l~~ 142 (348)
...||+++++.|+......+++++|+..|+..++. +.+.+|+.++.+|+..+++++++.+ +.+++++++.++.|++
T Consensus 5 ~~iTl~~~~~~w~~~~~~~~~~~~T~~~y~~~~~~~i~~~~g~~~l~~It~~~i~~~~~~l~~~~~s~~t~~~~~~~l~~ 84 (117)
T 2kkp_A 5 SKITVEQWLNRWLTDYAKPHLRQSTWESYETVLRLHVIPTLGSIPLKKLQPADIQRLYASKLESGLSPTRVRYIHVVLHE 84 (117)
T ss_dssp CCSCHHHHHHHHHHHHTSCCCSCCCCSHHHHHHHHHHCCCCCTSCTTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 84889999999999988778999999999999999999997888099977799998888776257417789789999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9964455200105665103464324444
Q gi|254780134|r 143 LFKWAVRQEYVAINPCLSVERPKRKTEG 170 (348)
Q Consensus 143 ~~~~a~~~~~i~~NP~~~v~~~~~~~~~ 170 (348)
+|+||+++|+|..||+..|+.|+.+.+.
T Consensus 85 ~~~~Av~~~~i~~NP~~~vk~Pk~P~~~ 112 (117)
T 2kkp_A 85 AMSQARESGLLLQNPTEAAKPPRHPLEH 112 (117)
T ss_dssp HHHHHHTTTSCSSCGGGGSCCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCHHHCCCCCCCCCC
T ss_conf 9999999869052907319789998655