HHsearch results for GI: 254780134 and protein with PDBid: 2oxo_A
>2oxo_A Integrase; DNA-binding protein, four-helix bundle, DNA binding protein; 2.00A {Unidentified phage}
Probab=99.58 E-value=7.2e-15 Score=113.75 Aligned_cols=99 Identities=20% Similarity=0.195 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHH
Q ss_conf 87899999999835543569788999999999999995699958969999999887515--9978999999999999964
Q gi|254780134|r 69 TTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESRK--HTPSSAIQFLTSMRVLFKW 146 (348)
Q Consensus 69 ~Tl~~l~~~y~~~~~~~~l~~~T~~~~~~~~~~~~~~~g~~~l~~it~~~i~~~~~~~~--~~~~t~n~~~~~l~~~~~~ 146 (348)
.||.++++.|+.....++++++|...|...++++.+.||+.++.+|++.||++|++.+. .++.|+++.++.|+.+|+|
T Consensus 1 iTl~~~~~~yl~~~~~~~~~~~T~~~y~~~l~~~~~~~g~~~l~~it~~~i~~~~~~~~~~~~~~t~~~~~~~l~~~f~~ 80 (103)
T 2oxo_A 1 MTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFRE 80 (103)
T ss_dssp CBHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSCSCBGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 96999999999999887999999999999999999998689677764698999999999847715899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCC
Q ss_conf 455200105665103464324
Q gi|254780134|r 147 AVRQEYVAINPCLSVERPKRK 167 (348)
Q Consensus 147 a~~~~~i~~NP~~~v~~~~~~ 167 (348)
|+..|+++.||+..|+.|+.+
T Consensus 81 Av~~g~i~~NP~~~vk~pk~k 101 (103)
T 2oxo_A 81 AIAEGHITTNHVAATRAAKSE 101 (103)
T ss_dssp HHHTTSCSSCTTC--------
T ss_pred HHHCCCCCCCCHHHCCCCCCC
T ss_conf 998889576954316667878