Probab=99.88 E-value=5.4e-23 Score=165.02 Aligned_cols=153 Identities=19% Similarity=0.208 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHCCCC----HHHHHHHHHHHCCCCCCCCCCCCCCEEEEE--CCCCCCCCCHHHHHHCCHHHHHHH--
Q ss_conf 165234456666403780----899998989861887310025664014430--233211331024331121689999--
Q gi|254780134|r 173 PWTKEDMQQFKSFWSEGS----QPRLAFEFLLYSGLRCSDSCRAGVQHLQNN--IFSIKTQKTGTIITVELPDGFMKL-- 244 (348)
Q Consensus 173 ~~t~~ei~~~~~~~~~~~----~~~~~~~l~~~TG~R~~Ei~~L~~~did~~--~i~~~~~Kt~~~~~vpl~~~l~~~-- 244 (348)
.+|+||+.++++....+. +.++++.++++||||.+|++.|+|.||+.+ .|.+. .|+.+.+.++........
T Consensus 2 ~Lt~eei~~ll~~~~~~~~~~lRd~~l~~l~~~tG~R~~ei~~L~~~~i~~~~~~i~~~-~~~~k~r~~~~~~~~~~~~~ 80 (182)
T d1a0pa2 2 DLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVI-GKGNKERLVPLGEEAVYWLE 80 (182)
T ss_dssp CCCHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHCCCHHHHTTCBGGGEETTTTEEEEE-CSSSCEEEEECCHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEE-CCCCEEEEEEECCHHHHHHH
T ss_conf 89999999998274638818799999999999967764774202141411443289983-68980125752001335566
Q ss_pred --HHH------HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf --964------201332211222457758778999999999983889---981402699999999848998899999649
Q gi|254780134|r 245 --LAM------TPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVN---KSAHGVRKFSATISADAGATAHELMATYGW 313 (348)
Q Consensus 245 --l~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~agi~---~~~H~lRht~at~l~~~G~~~~~i~~~lGH 313 (348)
+.. .......++....+.++...++...++.++..+|++ .++|+|||||||.+.++|+++.+|+++|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~H~~Rht~at~l~~~G~~~~~I~~~lGH 160 (182)
T d1a0pa2 81 TYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGH 160 (182)
T ss_dssp HHHHHTHHHHHTTCCCCBSSBCTTSSBCCHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHCSSCGGGSSCC--
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 65531123001234565421023577366899999999999984998578361414658999655649999999999589
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 9989999999999
Q gi|254780134|r 314 KTVDQAETYTKGA 326 (348)
Q Consensus 314 ss~~~t~~Y~~~~ 326 (348)
+|..||++|.+..
T Consensus 161 ~s~~tt~~Y~~~~ 173 (182)
T d1a0pa2 161 SDLSTTQIYTHVA 173 (182)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCHHHHHHHHCCC
T ss_conf 9889999876879
class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Recombinase XerD
species: Escherichia coli [TaxId: 562]