BLAST/PSIBLAST alignment of GI: 254780134 and GI: 240850538 at iteration 1
>gi|240850538|ref|YP_002971937.1| phage-related integrase/recombinase [Bartonella grahamii as4aup] Length = 345
>gi|240267661|gb|ACS51249.1| phage-related integrase/recombinase [Bartonella grahamii as4aup] Length = 345
 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 187/342 (54%), Gaps = 11/342 (3%)

Query: 6   RLPPFVTKERTRHGKIIYYFRKGHGRRIRLPYPHEST-FIPAYMSAL----TGSTPKREY 60
           R PP + +ERTRHGK+I+Y R GHG R R+   + +  F+  Y  A+     GS+  +  
Sbjct: 4   RRPPHLVRERTRHGKVIWYVRIGHGPRFRIEGTYGTQEFVDNYTLAIKQAQNGSSKTKR- 62

Query: 61  INSPRKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIR 120
               R    +  WL+ +Y +S  W + + +++       + + +  GD  Y+ I  +HI 
Sbjct: 63  --RTRLTEGSFDWLLHQYLQSMQWHNQSESTKKVKYRILNNVSKHIGDRAYKSINKQHIL 120

Query: 121 SGVESRKHTPSSAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKR-KTEGIRPWTKEDM 179
             V+ R+ TP++A  FLTS+  LF WAV    +  NP  +++ PK   +EG+ PW +ED+
Sbjct: 121 EAVDRRRETPAAAKHFLTSLNGLFNWAVDNALLNRNPAFNIKAPKSLNSEGLLPWREEDI 180

Query: 180 QQFKSFWSEGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGTIITVELP- 238
            ++   WS G+  R+  + LLY+GLR  D+ R G + +++NI  +KT+K+     V LP 
Sbjct: 181 DKYYHRWSHGTHERVWIDVLLYTGLRRGDAVRIGWKDVKDNIIYLKTEKSQFKTDVFLPI 240

Query: 239 -DGFMKLLAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVNKSAHGVRKFSATIS 297
                + L + PIG ETF       K+    F   F+     AG+ KSAHG+RK +AT +
Sbjct: 241 LPELEETLKIGPIGNETFICGKGGNKLVKESFGNLFREACNAAGIKKSAHGLRKLAATRA 300

Query: 298 ADAGATAHELMATYGWKTVDQAETYTKGADRIRLGIKNSRRI 339
           A+AGAT  ++ A +GW     A  YTK ADR RL I+  +++
Sbjct: 301 ANAGATVSQMKALFGWTEDKMASLYTKTADRKRLAIEAIKKL 342