BLAST/PSIBLAST alignment of GI: 254780134 and GI: 319409101 at iteration 1
>gi|319409101|emb|CBI82745.1| phage-related integrase/recombinase [Bartonella schoenbuchensis R1] Length = 347
 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 183/339 (53%), Gaps = 9/339 (2%)

Query: 8   PPFVTKERTRHGKIIYYFRKGHGRRIRLPYPHEST-FIPAYMSAL---TGSTPKREYINS 63
           PP + KE TRHGK I+Y R GHG+R R+   + +  F+  Y  AL       P++  I  
Sbjct: 6   PPHLIKEITRHGKTIWYVRIGHGQRYRVYGTYGTQEFVDNYTLALKEAQNGLPRQ--IKR 63

Query: 64  PRKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGV 123
            R    +  WL+ +Y +S  W + A +++   +   + I +  G   Y+ I  +HI   V
Sbjct: 64  TRLMEGSFDWLMHQYLQSMQWHNQAESTKKVKQRILNNISQHIGTCSYKSIEKQHILDAV 123

Query: 124 ESRKHTPSSAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKR-KTEGIRPWTKEDMQQF 182
           E R+ TP++A  FLT++  LF WAV    +  NP  +++ PK   TEG  PW +ED+ ++
Sbjct: 124 ERRRETPAAARHFLTALNGLFNWAVDNSLLHRNPAFNIKPPKSFNTEGFSPWLEEDIDKY 183

Query: 183 KSFWSEGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGTIITVELP--DG 240
              W  G+  R+  + LLY+GLR  D  R G + + +NI  +KT+K+     V LP    
Sbjct: 184 HQRWPLGTHERVWIDVLLYTGLRRGDVVRVGWKDVTDNIIHLKTEKSKFQTDVFLPILPE 243

Query: 241 FMKLLAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVNKSAHGVRKFSATISADA 300
             K L   PIG ETF    + +K+    F   F+     AG+ KSAHG+RK +AT +A+A
Sbjct: 244 LAKTLEAGPIGNETFICGKEGKKLTKESFGNLFRKACNAAGIKKSAHGLRKLAATRAANA 303

Query: 301 GATAHELMATYGWKTVDQAETYTKGADRIRLGIKNSRRI 339
           GAT  +L A +GW   D A  YTK ADR RL I+  +++
Sbjct: 304 GATVSQLKAIFGWTEDDMASLYTKTADRKRLAIEAIKKL 342