PSIBLAST alignment of GI: 254780134 and protein with PDB id: 1z1g
>gi|71042133|pdb|1Z1G|A Chain A, Crystal Structure Of A Lambda Integrase Tetramer Bound To A Holliday Junction Length = 356
>gi|71042134|pdb|1Z1G|C Chain C, Crystal Structure Of A Lambda Integrase Tetramer Bound To A Holliday Junction Length = 356
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/331 (17%), Positives = 109/331 (32%), Gaps = 23/331 (6%)
Query: 4 SLRLPPFVTKERTRHGKIIYYFRKGHGRRIRLPYPHESTFIPAYMSALT---GSTPKREY 60
LPP + R+ Y G+ L A + + G K
Sbjct: 9 RRDLPPNLY---IRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLT 65
Query: 61 INSPRKKPTTLKWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIR 120
TL + Y K + + I++ S I R D ITTK I
Sbjct: 66 ARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYXSKIKAIRRGLPDAPLEDITTKEIA 125
Query: 121 SGVESR--KHTPSSAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKRKTEGIRPWTKED 178
+ + + +SA +++ F+ A+ + ++ N + K + R E
Sbjct: 126 AXLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSEVRRSRLTADEY 185
Query: 179 MQQFKSFWSEGSQPRLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGTIITVELP 238
++ +++ S RLA E + +G R D C + + ++ KTG I +
Sbjct: 186 LKIYQAAESSPCWLRLAXELAVVTGQRVGDLCEXKWSDIVDGYLYVEQSKTGVKIAIPTA 245
Query: 239 DGFMKL---------LAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGV-----NK 284
L +G ET + ++ +++ S +F +G+
Sbjct: 246 LHIDALGISXKETLDKCKEILGGETIIASTRREPLSSGTVSRYFXRARKASGLSFEGDPP 305
Query: 285 SAHGVRKFSATISADAGATAHELMATYGWKT 315
+ H +R SA + + G K+
Sbjct: 306 TFHELRSLSA-RLYEKQISDKFAQHLLGHKS 335