RPSBLAST alignment of GI: 254780134 and protein with PDBid: 3lys
>3lys_A Prophage PI2 protein 01, integrase; helical N-terminal domain, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactococcus lactis} Length = 112
Score = 39.8 bits (93), Expect = 0.001
Identities = 11/98 (11%), Positives = 30/98 (30%), Gaps = 7/98 (7%)
Query: 72 KWLISEYRKSAHWGSLAVNSRISFESYFDQIIRKSGDFDYRKITTKHIRSGVESRKHTPS 131
W+ Y+K ++ + +E + + +IT + + T +
Sbjct: 14 DWM-ELYKK----NAIDEMTYKGYEQTLKYLKTYMPNVLISEITASSYQRALNKFAETHA 68
Query: 132 --SAIQFLTSMRVLFKWAVRQEYVAINPCLSVERPKRK 167
S F T +R + + + + + +
Sbjct: 69 KASTKGFHTRVRASIQCLIEEGRLQKDFTTRAVVKGLE 106