RPSBLAST alignment of GI: 254780134 and SCOP domain: d1a0pa2

Alignment
>d1a0pa2 d.163.1.1 (A:111-292) Recombinase XerD {Escherichia coli [TaxId: 562]} Length = 182
 Score = 40.4 bits (93), Expect = 2e-04
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 14/146 (9%)

Query: 193 RLAFEFLLYSGLRCSDSCRAGVQHLQNNIFSIKTQKTGT-----------IITVELPDGF 241
           +   E L  +GLR S+     +  +      ++    G            +  +E     
Sbjct: 26  KAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEH 85

Query: 242 MKLLAMTPIGKETFFINNDKQKMNATQFSIWFKAKATKAGVNK---SAHGVRKFSATISA 298
            +   +  +  +  F +   Q+M    F    K  A  AG++    S H +R   AT   
Sbjct: 86  GRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLL 145

Query: 299 DAGATAHELMATYGWKTVDQAETYTK 324
           + GA    +    G   +   + YT 
Sbjct: 146 NHGADLRVVQMLLGHSDLSTTQIYTH 171

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Recombinase XerD
species: Escherichia coli [TaxId: 562]