BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] (408 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780135|ref|YP_003064548.1| hypothetical protein CLIBASIA_00070 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/408 (100%), Positives = 408/408 (100%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE Sbjct: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR Sbjct: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254780929|ref|YP_003065342.1| hypothetical protein CLIBASIA_04140 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/408 (91%), Positives = 381/408 (93%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254780914|ref|YP_003065327.1| hypothetical protein CLIBASIA_04065 [Candidatus Liberibacter asiaticus str. psy62] Length = 408 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/408 (91%), Positives = 381/408 (93%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254781007|ref|YP_003065420.1| hypothetical protein CLIBASIA_04540 [Candidatus Liberibacter asiaticus str. psy62] Length = 411 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/408 (91%), Positives = 380/408 (93%) Query: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHV 60 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTA LQEVLDHV Sbjct: 1 MFQNKNFLLGVLRLKKCTRGVFLVITAILLSSFVAIVDVVVDQVTVMQKTAWLQEVLDHV 60 Query: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNIGSIESIVKDAVILTKNVNSL 120 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSN GSIESIVKDAVILTKNVNSL Sbjct: 61 IYRTSPKNLYDLREAGRDNFIRHQIEKALNTYNSRDLSNTGSIESIVKDAVILTKNVNSL 120 Query: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA Sbjct: 121 PLQFTVDIALSTTVQLRGSLLQMFSQSKGKVDISRRKKVMYKQNIGLMIMPFAWDGYWLA 180 Query: 181 SRGKVADSQVHRPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYKSIFYWAFE 240 SRGKVADS+VH PKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHY SI YWA Sbjct: 181 SRGKVADSKVHPPKYLEYSHYYQQYLNRNTLVKNFLSQIPYKNFCMAPYHYSSILYWAVG 240 Query: 241 NFQYHQDNNMLIFYSHRDFYRITWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Y DN ++D Y TWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA Sbjct: 241 TLTYSVDNKTTTREYYKDPYYATWDHFPYSFIKNVFDMTSNQFGDGQVLTNTNHCFPHGA 300 Query: 301 SHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQDTR 360 S +KYMLM AIGNQLSRSSV KE I+++LQDC+YMHK HRTGR AITIFSVGFSPDQDTR Sbjct: 301 SQNKYMLMLAIGNQLSRSSVEKEKIEKVLQDCHYMHKRHRTGRDAITIFSVGFSPDQDTR 360 Query: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS Sbjct: 361 YTLRQCASDPSKYYEINSDENVMPIAKSLARNVITNWFSQFTITVVDS 408 >gi|254781108|ref|YP_003065521.1| von Willebrand factor type A [Candidatus Liberibacter asiaticus str. psy62] Length = 398 Score = 30.8 bits (68), Expect = 0.045, Method: Compositional matrix adjust. Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 299 GASHSKYMLMFAIGNQLSRSSVGKETIDRILQDCYYMHKHHRTGRGAITIFSVGFSPDQD 358 G++ K ++F + S +S + T++ LQ C YM + I+SV S + Sbjct: 300 GSTRLKKFVIFITDGENSGASAYQNTLN-TLQICEYMR------NAGMKIYSVAVSAPPE 352 Query: 359 TRYTLRQCASDPSKYYEINSDENVM 383 + LR+C +++ +N ++ Sbjct: 353 GQDLLRKCTDSSGQFFAVNDSRELL 377 >gi|254780388|ref|YP_003064801.1| hypothetical protein CLIBASIA_01365 [Candidatus Liberibacter asiaticus str. psy62] Length = 458 Score = 26.9 bits (58), Expect = 0.60, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Query: 349 FSVGFSPDQDTRYTLRQCASDPSKYYEINS 378 FSV + + RY L CAS P+ ++E NS Sbjct: 405 FSVNKTQQEKARYFLSNCAS-PNSFFEANS 433 Score = 26.2 bits (56), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 14 LKKCTRGVFLVITAILLSSFVAIVDVVVDQVT-VMQKTALLQEVLDHVIYRTSP--KNLY 70 +K CT G F +ITA+L+ + + ++VD V + AL Q +I + P ++L Sbjct: 15 IKSCT-GHFFIITALLMPVMLGVGGMLVDVVRWSYYEHALKQAAQTAIITASVPLIQSLE 73 Query: 71 DLREAGRDNFI--RHQIEKAL 89 ++ +++F + +IE+ L Sbjct: 74 EVSSRAKNSFTFPKQKIEEYL 94 >gi|254780311|ref|YP_003064724.1| hypothetical protein CLIBASIA_00980 [Candidatus Liberibacter asiaticus str. psy62] Length = 177 Score = 25.8 bits (55), Expect = 1.4, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%) Query: 366 CASDPSKYYEINSDENVMPIAKS 388 CA+DP YEI+S ENV+ + + Sbjct: 155 CATDP---YEISSPENVLKVIRE 174 >gi|254780833|ref|YP_003065246.1| hypothetical protein CLIBASIA_03630 [Candidatus Liberibacter asiaticus str. psy62] Length = 371 Score = 25.4 bits (54), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 26/51 (50%) Query: 19 RGVFLVITAILLSSFVAIVDVVVDQVTVMQKTALLQEVLDHVIYRTSPKNL 69 +G ++TAILL ++ +V++ A L +LDH + T+ K L Sbjct: 14 KGSISILTAILLPVIFIVMGLVIETSHKFFVKAKLHYILDHSLLYTATKIL 64 >gi|254780719|ref|YP_003065132.1| zinc uptake ABC transporter, permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 260 Score = 25.4 bits (54), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 270 SFIKNV-FDMTSNQFGDGQVLTNTNHCFPHGASHSKYMLMFAIGNQLSRSSVGKE 323 SF+K V D+TS FGD + T+ G M++F I L ++V E Sbjct: 103 SFMKWVNTDLTSFLFGDILAVNTTDILLIWGIGFLNIMILFKIWKPLLATTVNYE 157 >gi|254780831|ref|YP_003065244.1| hypothetical protein CLIBASIA_03620 [Candidatus Liberibacter asiaticus str. psy62] Length = 341 Score = 25.0 bits (53), Expect = 2.5, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 149 GKVDISRRKKVMYKQNIGLMIMPFA 173 GKV+IS +K + K+N G+ IM A Sbjct: 147 GKVEISDKKFLKPKENYGIKIMSMA 171 >gi|254781075|ref|YP_003065488.1| hypothetical protein CLIBASIA_04885 [Candidatus Liberibacter asiaticus str. psy62] Length = 266 Score = 24.3 bits (51), Expect = 3.9, Method: Compositional matrix adjust. Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Query: 176 GYWLASRGKVADSQVHRPKYLEY 198 G W+ SRG++ SQ+ R +Y+ Y Sbjct: 243 GKWI-SRGEIQRSQIARREYIGY 264 >gi|254780759|ref|YP_003065172.1| hypothetical protein CLIBASIA_03230 [Candidatus Liberibacter asiaticus str. psy62] Length = 162 Score = 24.3 bits (51), Expect = 3.9, Method: Compositional matrix adjust. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Query: 343 RGAITIFSVGFS-PDQDTRYTLRQCASD 369 G+ + FS P D +YT+ CASD Sbjct: 96 EGSKHTMNAEFSVPKNDEKYTISACASD 123 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.324 0.136 0.411 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 264,828 Number of Sequences: 1233 Number of extensions: 10963 Number of successful extensions: 48 Number of sequences better than 100.0: 15 Number of HSP's better than 100.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 33 Number of HSP's gapped (non-prelim): 17 length of query: 408 length of database: 328,796 effective HSP length: 76 effective length of query: 332 effective length of database: 235,088 effective search space: 78049216 effective search space used: 78049216 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 39 (19.6 bits)