HHsearch results for GI: 254780136 and protein with PDBid: 1jk0_B

>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=99.96  E-value=2.3e-30  Score=204.06  Aligned_cols=113  Identities=23%  Similarity=0.471  Sum_probs=102.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             94037899999999999996770003112299999999999999999857630876018899999999999999999985
Q gi|254780136|r    1 MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI   80 (125)
Q Consensus         1 ~RDE~lH~~~~~~l~~~l~~e~pe~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yiky~an~rL~~l   80 (125)
                      +|||++|+.|++.|++.++.+.       ..+.+++++++||++|.+|+.++++.+++|||++++++||+|+||+||.+|
T Consensus       217 ~RDE~lH~~f~~~l~~~l~~e~-------~~~~i~~~~~eave~e~~~~~~~~~~~~~gl~~~~~~~Yi~y~an~~L~~l  289 (345)
T 1jk0_B          217 CRDRGAYTDFSCLLFAHLRTKP-------NPKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGF  289 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCC-------CHHHHHHHHHHHHHHHHHHHTTSCC-----------CTHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             8689999999999999975100-------035899999999999999998545655336589999999999999999977


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             978788987888689999834665732131003333430657
Q gi|254780136|r   81 GLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAEL  122 (125)
Q Consensus        81 Gl~~~f~~~~nPl~W~~~~~~~~~~~nFFE~r~t~Y~k~~~~  122 (125)
                      |++|+|++ +||+|||+...+ .+++||||+|||+|+|+|++
T Consensus       290 G~~~~f~~-~nP~~w~~~~~~-~~ktnFFe~r~t~Y~k~~~~  329 (345)
T 1jk0_B          290 GNEKYYNA-VNPFEFMEDVAT-AGKTTFFEKKVSDYQKASDM  329 (345)
T ss_dssp             TCCCCC------------------------------------
T ss_pred             CCCCCCCC-CCCHHHHHHHHC-CCCCCCCCCCHHHCCCCCCC
T ss_conf             99987899-997489998737-67764457763312035556