HHsearch alignment for GI: 254780137 and conserved domain: COG1995
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism].
Probab=98.02 E-value=0.0012 Score=44.15 Aligned_cols=262 Identities=13% Similarity=0.107 Sum_probs=149.7
Q ss_pred CEEEEECCC----CCHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH-
Q ss_conf 469982477----4046799999985275-0899955989999999984987665468423062025567899999999-
Q gi|254780137|r 458 KRILFSAGE----DERVLRATQILIKENI-ARPVLIGSLLTIQDNIRRHDLQIIATKDFDVIDLNNKQSLKDYVDSYRS- 531 (779)
Q Consensus 458 KRIVfaEge----D~rVLrAA~~~~eeGi-a~PILVG~~e~I~~~~~~~gL~l~~~~dieIidp~~~~~~~~ya~~l~~- 531 (779)
T Consensus 4 ~~iAit~GDPaGIGPEi--~~~~~~~~~~~~~~v~igd~~lL~~~~~~l~~~~~~~--~~~~~~~~~--~~~~~~~l~~l 77 (332)
T COG1995 4 PRIAITMGDPAGIGPEL--VALALAELPIKCELVVIGDKALLEAAAALLGLPVFLL--EAIPDPYEA--FAAGAIDLPDL 77 (332)
T ss_pred CCEEECCCCCCCCCHHH--HHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCH--HCCCCHHHH--HHCCCCCEEEC
T ss_conf 85686468866679999--9986210467787699858999999998746653110--014660445--42147622422
Q ss_pred -HHH----HCCC-CHHHHHHHHHHCHHHHHHHHHHCCCCCEEECCCCCCC-------CHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf -876----3799-9899999986253567899986572100100446777-------40467777763068766850121
Q gi|254780137|r 532 -LSA----EKGI-SLDSIYDLLRSNTTLLGSLALKRGEGDGMICMCDSES-------GYNSHLTDIHKIIGMGLGISHYS 598 (779)
Q Consensus 532 -~~~----RKG~-~~~~A~~~vr~d~~~faa~MV~~G~AD~lI~G~~~t~-------~y~~~lr~~~~vIG~~~g~~~vs 598 (779)
T Consensus 78 ~~~~~~~v~~G~~~~~~g~~~~~--~l~~A~~~a~~G~~~aivT~PI~K~~l~~AG~~y~GhTe~LA~~s~~~~------ 149 (332)
T COG1995 78 PLPLPAPVEAGQLSAANGAYVFE--TLKRAVELALAGEVDAIVTAPINKEALNDAGIPYPGHTEFLAELSGTHD------ 149 (332)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHH--HHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCC------
T ss_conf 45776765688757134089999--9999999873673467996564789999648998977899999857997------
Q ss_pred EECCCCCCCCEEEEECCCCCC-------CCCHHHHHHHHHHHHHHH-HHCCCC-CCEEEEEEC----CCCCCCCCCHHHH
Q ss_conf 001355777349997473688-------989889999999999999-981899-729999702----5578889778999
Q gi|254780137|r 599 AMSMCIVRDNFLFFTDTHVSA-------EPSAMEIADSTILASQAI-CSLGMR-PKVSVLFHS----NSGSHCIKSSLKM 665 (779)
Q Consensus 599 ~~~il~~~~~~lFiaDtaVNi-------~PtaEqLAdIa~~aa~~a-r~lGie-PkVAlLS~S----nfGs~~~~s~~kv 665 (779)
T Consensus 150 ~vMmla~~~--Lrv~lvTtHipL~~V~~~iT~e~l~~~~~i~~~~L~~~fGi~~PriaVaGLNPHaGE~G~lG~EE~diI 227 (332)
T COG1995 150 PVMMLAVPE--LRVALVTTHIPLKDVPDAITPELLLEVLRILDKDLRKKFGIAEPRIAVAGLNPHAGEGGLLGREEIDII 227 (332)
T ss_pred EEEEEECCC--CEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHH
T ss_conf 179861464--179987504618887766589999999999999999862988763688614898876777773477888
Q ss_pred HHHHHHHHHHCCCCEEECCCCHHHHCCHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEECHHHCCCCC
Q ss_conf 99999998737995998673046532989896308998777777778818912888999999986598687144314589
Q gi|254780137|r 666 RDSFEKICELSKNLEVDAIVQEEVCLSEIFCDKDVPNTSSSQDAQLLVFPNIDSANIALEMAKSVTNGLHIGTLLLGAAL 745 (779)
Q Consensus 666 r~A~eil~~~~pd~~VDGemq~D~AL~~~ia~~K~p~S~laG~ANVLIfPnLeAaNI~yKllq~lgga~aiGPIL~G~~k 745 (779)
T Consensus 228 ~Paie~aR~~--Gi~~~GPlpADT~F~~~~~~~----------~DavlaMYHDQgliplK~l~Fd---~~VN-vtlGL-- 289 (332)
T COG1995 228 IPAIEEARAE--GIDLVGPLPADTLFHPAYLAN----------YDAVLAMYHDQGLIPLKYLGFD---RGVN-VTLGL-- 289 (332)
T ss_pred HHHHHHHHHH--CCCCCCCCCCCHHHHHHHHCC----------CCEEEEEECCCCCHHHHHHCCC---CCEE-EECCC--
T ss_conf 9999999981--873348999414420345505----------7879996226643556442235---3257-73388--
Q ss_pred CEEECCCC
Q ss_conf 87987876
Q gi|254780137|r 746 PVHIVPSS 753 (779)
Q Consensus 746 PV~ilsr~ 753 (779)
T Consensus 290 PfiRTS~D 297 (332)
T COG1995 290 PFIRTSVD 297 (332)
T ss_pred CEEEECCC
T ss_conf 70340687