HHsearch alignment for GI: 254780137 and conserved domain: PRK00258
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed.
Probab=97.69 E-value=0.00069 Score=45.85 Aligned_cols=228 Identities=17% Similarity=0.257 Sum_probs=117.3
Q ss_pred ECCCCEECCC-CCCCCCCCCCHHHHHHHHHHHHCCCCE--EEEECCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCHHHHH
Q ss_conf 8178500254-220510583001008999986269852--6542388988999999987088846062220648015799
Q gi|254780137|r 85 VSNGSAVLGL-GDIGPLASKPVMEGKAVLFKKFAGINV--FDIEINAKDVDTMVSTIVALEPTFGGINLEDIKAPECFEV 161 (779)
Q Consensus 85 vtdGt~vLGL-GdiG~~a~~pvmeGK~~L~k~~agid~--~~i~~~~~d~~e~i~~v~~~~p~fg~i~lEDi~~p~~f~i 161 (779)
T Consensus 1 i~~~tk~~gliG~pi~hS~SP~ihn--~~f~~~g-l~~~Y~~~~v~~~~l~~~i~~l~~~--~~~G~nV---T~P~K~~v 72 (275)
T PRK00258 1 ITGKTDLYAVIGNPIAHSKSPFIHN--AAAKQLG-LDGEYLAFLVPLDDLEDAVRGFFAL--GGKGANV---TVPFKEAA 72 (275)
T ss_pred CCCCCCEEEEECCCCCCCCCHHHHH--HHHHHCC-CCCEEEEEECCHHHHHHHHHHHHHC--CCCEEEE---CHHHHHHH
T ss_conf 9887628999888824130799999--9999869-9938998878888999999977766--9877996---68989999
Q ss_pred H---HHHHHH------HCCCCCC-CCCCCHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCE
Q ss_conf 9---999987------1894216-87721899999999999997098822411787425425678999999819885758
Q gi|254780137|r 162 E---RILSQK------LKIPFLH-DDQHGTAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENI 231 (779)
Q Consensus 162 ~---~~l~~~------~~ipvf~-DD~qGTa~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i 231 (779)
T Consensus 73 ~~~ld~l~~~A~~igavNTi~~~~g~l~G~NT-D~~G~~~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~--~i 149 (275)
T PRK00258 73 FALADELSERARLAGAVNTLVLEDGRLIGDNT-DGIGFVRDLERLGLDLKGKRILLLGAGGAARAVILPLLELGVA--EI 149 (275)
T ss_pred HHCCCHHHHHHHHHCCEEEEEEECCEEEEEEC-CHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCC--EE
T ss_conf 86246021778874554589955998999836-7789999999848785687599988871079999999976999--89
Q ss_pred EEEECCCEEECCCCCCCCHHHHHHHHCCC---CCCHHHHCCCCCEEEECCCCCC---CCHHHHHHCCCCCEEEEEC-CCC
Q ss_conf 99955960307873326678897745088---9888886058837862578877---8988997218997799917-872
Q gi|254780137|r 232 WVYDLEGLVYEGREKKFDKWKSVYAQKSG---PKPLSETMNNADVFLGLSVAGA---LDPAILKFMAEKPLIMVLA-NPN 304 (779)
Q Consensus 232 ~~~D~~Gli~~~r~~~~~~~~~~~a~~~~---~~~l~ea~~~adv~iG~S~~g~---~t~e~v~~M~~~PiIfaLs-NP~ 304 (779)
T Consensus 150 ~i~nR~----~~~a---~~l~~~~~~~~~~~~~~~~~~~~~~~diiInaTp~Gm~~~~~~~~~~~~~~~~~v~D~~Y~P~ 222 (275)
T PRK00258 150 TIVNRT----VERA---EELAELFGEGVQALGLDELAGELADFDLIINTTSAGMSGELPPLPASLLRPGTVVYDMIYGPL 222 (275)
T ss_pred EEEECC----HHHH---HHHHHHHCCCCCEEEHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCC
T ss_conf 999589----9999---999998356762753787543044577799657777778865113876488866998665799
Q ss_pred CCCCHHHHHHHCCCEEECCCCCCCCCCC
Q ss_conf 0099889985189879805887887743
Q gi|254780137|r 305 PEAMPDEIKKVRPDAMICTGRSDFSNQV 332 (779)
Q Consensus 305 pEi~p~~a~~~~g~aivatGrs~~pnQ~ 332 (779)
T Consensus 223 ~T~ll~~a~-~~G~~~-i~Gl~Mli~Qa 248 (275)
T PRK00258 223 PTPFLAWAK-AQGART-VDGLGMLVHQA 248 (275)
T ss_pred CCHHHHHHH-HCCCEE-ECCHHHHHHHH
T ss_conf 999999999-882948-57799999999