HHsearch alignment for GI: 254780137 and conserved domain: PRK01710

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=91.94  E-value=0.76  Score=24.85  Aligned_cols=108  Identities=18%  Similarity=0.285  Sum_probs=63.2

Q ss_pred             HHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCC----CCCCHHHHCCCCCEEE
Q ss_conf             224117874254256789999998198857589995596030787332667889774508----8988888605883786
Q gi|254780137|r  200 FSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKS----GPKPLSETMNNADVFL  275 (779)
Q Consensus       200 l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~----~~~~l~ea~~~adv~i  275 (779)
T Consensus        12 l~~kkv~i~GlG~sG~a~a~~L~~~g~---~v~~~D~~-----~-~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~d~vv   82 (458)
T PRK01710         12 IKNKKVAVVGIGVSNIPLIKFLVKLGA---KVTAFDKK-----S-EEELGEISLELKEKGVNLELGENYLDKLTGFDVIF   82 (458)
T ss_pred             HCCCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECC-----C-CHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCEEE
T ss_conf             789969999787889999999997889---79999898-----8-43148999999857998995784054237888899


Q ss_pred             ECCCCCCCCHHHHHHCCCC-CEEEEECCCCCCCCHHHHHH-HCCCEEECCCC
Q ss_conf             2578877898899721899-77999178720099889985-18987980588
Q gi|254780137|r  276 GLSVAGALDPAILKFMAEK-PLIMVLANPNPEAMPDEIKK-VRPDAMICTGR  325 (779)
Q Consensus       276 G~S~~g~~t~e~v~~M~~~-PiIfaLsNP~pEi~p~~a~~-~~g~aivatGr  325 (779)
T Consensus        83 ~SPgI~~~~p~~~~a~~~gi~v~-------~e--~el~~~~~~~~~IaVTGT  125 (458)
T PRK01710         83 KTPSMRIDSPELVKAKEEGAYIT-------SE--MEEFIKYCPAKVFGITGS  125 (458)
T ss_pred             ECCCCCCCCHHHHHHHHCCCCEE-------CH--HHHHHHHCCCCEEEEECC
T ss_conf             89987998999999998799374-------09--999986375877999368