HHsearch alignment for GI: 254780137 and conserved domain: PRK03369

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=93.87  E-value=0.4  Score=26.81  Aligned_cols=86  Identities=14%  Similarity=0.146  Sum_probs=51.5

Q ss_pred             HCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCC
Q ss_conf             41178742542567899999981988575899955960307873326678897745088988888605883786257887
Q gi|254780137|r  202 DIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKSGPKPLSETMNNADVFLGLSVAG  281 (779)
Q Consensus       202 ~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~~~~~l~ea~~~adv~iG~S~~g  281 (779)
T Consensus        12 Gk~V~V~GlG~sG~a~a~~L~~~G~---~v~~~D~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vV~SPGI~   81 (487)
T PRK03369         12 GAPVLVAGAGVTGRAVLAALTRFGA---RPTVCDDD-------PDALRPHAERGVATVSSSDAVQQIADYALVVTSPGFP   81 (487)
T ss_pred             CCEEEEEEECHHHHHHHHHHHHCCC---EEEEEECC-------CHHHHHHHHCCCCEECCCCCHHHHCCCCEEEECCCCC
T ss_conf             8989999156838999999997869---79999898-------2577999865994863762265646778899899579


Q ss_pred             CCCHHHHHHCCCC-CEE
Q ss_conf             7898899721899-779
Q gi|254780137|r  282 ALDPAILKFMAEK-PLI  297 (779)
Q Consensus       282 ~~t~e~v~~M~~~-PiI  297 (779)
T Consensus        82 ~~~p~l~~a~~~gi~i~   98 (487)
T PRK03369         82 PTAPVLAAAAAAGVPIW   98 (487)
T ss_pred             CCCHHHHHHHHCCCCEE
T ss_conf             98999999998899076