HHsearch alignment for GI: 254780137 and conserved domain: PRK09424
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional.
Probab=97.62 E-value=0.00046 Score=47.09 Aligned_cols=252 Identities=19% Similarity=0.263 Sum_probs=134.9
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 889988875135847999817850025422051-0583001008999986269852654238898899999998708884
Q gi|254780137|r 67 EDPSKAAMYTNRSNLVAVVSNGSAVLGLGDIGP-LASKPVMEGKAVLFKKFAGINVFDIEINAKDVDTMVSTIVALEPTF 145 (779)
Q Consensus 67 ~~~~~~~~~t~~~n~vaVvtdGt~vLGLGdiG~-~a~~pvmeGK~~L~k~~agid~~~i~~~~~d~~e~i~~v~~~~p~f 145 (779)
T Consensus 18 ltP~~V~~Lvk~G~~V~VE~gAG~~agfsD~~Y~~AGA~Iv~-~~ev~~--a--diI-lKVk~P~~~E~----~~lr~g~ 87 (510)
T PRK09424 18 ATPKTVEQLLKLGFEVAVESGAGQLASFDDAAYEAAGAEIVD-GAEVWQ--S--DII-LKVNAPTDDEI----ALLREGA 87 (510)
T ss_pred CCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCEECC-HHHHHH--C--CEE-EEECCCCHHHH----HHCCCCC
T ss_conf 189999999978999999789883479898999973999957-889964--9--999-99799998999----7347998
Q ss_pred CEEEHHH-CCCCHHHHHHHHHHHHHCCCCCCCCC-------CC----HHHHHHHH----HHHHHHHHCC----------C
Q ss_conf 6062220-64801579999999871894216877-------21----89999999----9999997098----------8
Q gi|254780137|r 146 GGINLED-IKAPECFEVERILSQKLKIPFLHDDQ-------HG----TAVTVTAA----TLNGMKLVGK----------K 199 (779)
Q Consensus 146 g~i~lED-i~~p~~f~i~~~l~~~~~ipvf~DD~-------qG----Ta~v~lA~----llnAl~~~gk----------~ 199 (779)
T Consensus 88 ~Lis~L~pa~~~---el~~~L~~~-~vtaiA~E~VPRisRAQsmd~LSsms~IAGy~AVi~AA-~~l~r~~~g~~TaaG~ 162 (510)
T PRK09424 88 TLVSFIWPAQNP---ELMEKLAAR-GITVLAMDSVPRISRAQSLDALSSMANIAGYRAVVEAA-HEFGRFFTGQITAAGK 162 (510)
T ss_pred EEEEECCCCCCH---HHHHHHHHC-CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCC
T ss_conf 999976866798---999999975-99289752233257789997123578876678999999-8668667985335777
Q ss_pred HHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCE------------EECCCCCCCCHHHHHHHHCC-------C
Q ss_conf 2241178742542567899999981988575899955960------------30787332667889774508-------8
Q gi|254780137|r 200 FSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGL------------VYEGREKKFDKWKSVYAQKS-------G 260 (779)
Q Consensus 200 l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gl------------i~~~r~~~~~~~~~~~a~~~-------~ 260 (779)
T Consensus 163 VpPAkVlViGaGVAGlqAi~tA~~LGA---~V~a~DvR~~~~EqveSlGa~fv~v~~~e~-~~~~gGYAk~~s~e~~~~q 238 (510)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGA---IVRAFDTRPEVKEQVESMGAEFLELDFEEE-GGSGDGYAKVMSEEFIKAE 238 (510)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCCCHHHHHHH
T ss_conf 788528997464777999999962797---899965878899999970674255210102-4457850354567899999
Q ss_pred CCCHHHHCCCCCEEEECC------CCCCCCHHHHHHCCCCCEEEEECCCC---CCCC-HHHHHHH-CCCEEECCCCCCCC
Q ss_conf 988888605883786257------88778988997218997799917872---0099-8899851-89879805887887
Q gi|254780137|r 261 PKPLSETMNNADVFLGLS------VAGALDPAILKFMAEKPLIMVLANPN---PEAM-PDEIKKV-RPDAMICTGRSDFS 329 (779)
Q Consensus 261 ~~~l~ea~~~adv~iG~S------~~g~~t~e~v~~M~~~PiIfaLsNP~---pEi~-p~~a~~~-~g~aivatGrs~~p 329 (779)
T Consensus 239 ~~~~~e~~~~aDiVItTalIPG~~AP~LIt~emV~~MKpGSVIVDlAadqGGN~E~T~pge~~~~~~GV~ii--G~~nlp 316 (510)
T PRK09424 239 MALFAEQAKEVDIIITTALIPGKPAPKLITKEMVDSMKPGSVIVDLAAANGGNCELTVPGEVVVTDNGVKII--GYTDLP 316 (510)
T ss_pred HHHHHHHHHHCCEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEE--CCCCHH
T ss_conf 999999974247799865418998997037999952699978999525579971066399489941996998--888511
Q ss_pred CCC---------CHHHHHH
Q ss_conf 743---------5034556
Q gi|254780137|r 330 NQV---------NNVLCFP 339 (779)
Q Consensus 330 nQ~---------NN~l~FP 339 (779)
T Consensus 317 s~~~~~aS~lya~Ni~~~l 335 (510)
T PRK09424 317 SRLPTQSSQLYGTNLVNLL 335 (510)
T ss_pred CCCHHHHHHHHHHHHHHHH
T ss_conf 0377899999999999999