HHsearch alignment for GI: 254780137 and conserved domain: PRK12550
>PRK12550 shikimate 5-dehydrogenase; Reviewed.
Probab=95.18 E-value=0.26 Score=28.02 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=91.2
Q ss_pred HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHH---HH------HC--------CCC
Q ss_conf 99986269852654238898899999998708884606222064801579999999---87------18--------942
Q gi|254780137|r 111 VLFKKFAGINVFDIEINAKDVDTMVSTIVALEPTFGGINLEDIKAPECFEVERILS---QK------LK--------IPF 173 (779)
Q Consensus 111 ~L~k~~agid~~~i~~~~~d~~e~i~~v~~~~p~fg~i~lEDi~~p~~f~i~~~l~---~~------~~--------ipv 173 (779)
T Consensus 29 ~af~~-lgl~~~Y~~~~~~~l~~~i~~lr~--~~~~G~nV---TiP~K~~i~~~lD~ld~~A~~iGAVNTiv~~~g~l~G 102 (272)
T PRK12550 29 YLYEA-LGLNFLYKAFTTTDLTAAIGGVRA--LGIRGCAV---SMPFKEACIPLVDELDPSAKAIESVNTIVNTDGHLKA 102 (272)
T ss_pred HHHHH-CCCCEEEEEECHHHHHHHHHHHHH--CCCCEEEE---CCCCHHHHHHHHCCCCHHHHHHCCEEEEEEECCEEEE
T ss_conf 99998-799929986378779999998875--79988998---6436999999854368889972755479955998999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHH
Q ss_conf 16877218999999999999970988224117874254256789999998198857589995596030787332667889
Q gi|254780137|r 174 LHDDQHGTAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKS 253 (779)
Q Consensus 174 f~DD~qGTa~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~ 253 (779)
T Consensus 103 ~NTD~--------~G~~~~l~~~~~~-~~~~~lilGaGGaarai~~aL~~~G~~--~i~I~nR~----~~~a~------- 160 (272)
T PRK12550 103 YNTDY--------IAIAQLLEEYQVP-PDAVVALRGSGGMAKAVAAALRDAGFT--DGTIVARN----EKTGK------- 160 (272)
T ss_pred EECCH--------HHHHHHHHHCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCC--EEEEEECC----HHHHH-------
T ss_conf 93778--------9999999970888-677389973623389999999976998--79999899----89999-------
Q ss_pred HHHHCCCCCCHHH-HCCCCCEEEECCCCCC----------CCHHHHHHCCCCCEEEEEC-CC
Q ss_conf 7745088988888-6058837862578877----------8988997218997799917-87
Q gi|254780137|r 254 VYAQKSGPKPLSE-TMNNADVFLGLSVAGA----------LDPAILKFMAEKPLIMVLA-NP 303 (779)
Q Consensus 254 ~~a~~~~~~~l~e-a~~~adv~iG~S~~g~----------~t~e~v~~M~~~PiIfaLs-NP 303 (779)
T Consensus 161 ~L~~~~~~~~~~~~~~~~~dliINaTpvGm~~~~~~~~~~~~~~~l---~~~~~v~D~vY~P 219 (272)
T PRK12550 161 ALAELYGYEWRPDLGGIEADLLVNVTPIGMAGGPEADKLAFSEAEI---DAASVVFDVVALP 219 (272)
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHC---CCCCEEEEEECCC
T ss_conf 9998739733464334668979966766557897534588997885---8887899974389