HHsearch alignment for GI: 254780137 and conserved domain: TIGR00050
>TIGR00050 rRNA_methyl_1 RNA methyltransferase, TrmH family, group 1; InterPro: IPR004384 These proteins are part of the trmH (spoU) family of rRNA methylases. The spoU gene of Escherichia coli codes for a protein that shows strong similarities to previously characterised 2'-O-methyltransferases . TrmH is a tRNA (guanosine-2'-O-)-methyltransferase (2.1.1.34 from EC), which specifically methylates guanosine-18 in various tRNAs using S-adenosyl-L-methionine.; GO: 0008173 RNA methyltransferase activity.
Probab=90.41 E-value=0.93 Score=24.25 Aligned_cols=72 Identities=17% Similarity=0.303 Sum_probs=49.6
Q ss_pred HHCEEEEEC-CCHHHHH-HHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCC-----C---CCCHHHHCC-
Q ss_conf 241178742-5425678-9999998198857589995596030787332667889774508-----8---988888605-
Q gi|254780137|r 201 SDIKIVTLG-AGAAALA-CLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKS-----G---PKPLSETMN- 269 (779)
Q Consensus 201 ~~~~iv~~G-aGaAg~~-~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~-----~---~~~l~ea~~- 269 (779)
T Consensus 3 ~~I~ivLVep~~~gNvG~~ARaMKnmGl~--~L~Lv~p~~-------~~~~~eay~~A~~A~Di~~nA~vv~~L~Eal~s 73 (253)
T TIGR00050 3 ENISIVLVEPKHSGNVGSIARAMKNMGLE--ELILVNPRV-------DILEEEAYALAAHAKDILENAKVVDDLDEALDS 73 (253)
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHCCC--CCEEECCCC-------CCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHH
T ss_conf 12478886179986446999998762700--125646622-------556878999872027865875474267999873
Q ss_pred -CCCEEEECC-CCC
Q ss_conf -883786257-887
Q gi|254780137|r 270 -NADVFLGLS-VAG 281 (779)
Q Consensus 270 -~adv~iG~S-~~g 281 (779)
T Consensus 74 ld~~~~vgTsGaRG 87 (253)
T TIGR00050 74 LDCDLVVGTSGARG 87 (253)
T ss_pred CCCCEEEECCCCCC
T ss_conf 19970786267888