HHsearch alignment for GI: 254780137 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=94.99 E-value=0.088 Score=31.32 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=55.9
Q ss_pred HHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCC-------
Q ss_conf 9999999970988224117874254256789999998198857589995596030787332667889774508-------
Q gi|254780137|r 187 AATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKS------- 259 (779)
Q Consensus 187 A~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~------- 259 (779)
T Consensus 163 ~~~~~~~~~~~~~-~g~~VlV~GaG~iGl~a~~~ak~~Ga~--~Vi~~d~------------~~~rl~~A~~lGa~~~i~ 227 (358)
T TIGR03451 163 AGLGAAVNTGGVK-RGDSVAVIGCGGVGDAAIAGAALAGAS--KIIAVDI------------DDRKLEWAREFGATHTVN 227 (358)
T ss_pred HHHHHHHHHCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCC--EEEEEEC------------CHHHHHHHHHCCCEEEEC
T ss_conf 5468898640799-998899967376999999999983991--8999919------------889999999659909973
Q ss_pred -CCCCHHHHCC------CCCEEEECCCCCCCCHHHHHHCCCCCEEEEECCCC
Q ss_conf -8988888605------88378625788778988997218997799917872
Q gi|254780137|r 260 -GPKPLSETMN------NADVFLGLSVAGALDPAILKFMAEKPLIMVLANPN 304 (779)
Q Consensus 260 -~~~~l~ea~~------~adv~iG~S~~g~~t~e~v~~M~~~PiIfaLsNP~ 304 (779)
T Consensus 228 ~~~~~~~~~v~~~t~g~G~Dvvie~~G~~~~~~~al~~~~~gG~iv~~G~~~ 279 (358)
T TIGR03451 228 SSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPT 279 (358)
T ss_pred CCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 9987889999998589887499999999899999999762796999992258