HHsearch alignment for GI: 254780137 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.75 E-value=0.11 Score=30.57 Aligned_cols=121 Identities=19% Similarity=0.244 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHCEEEEECC-CHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCC-CCCHHHHHHHHC
Q ss_conf 899999999999997098822411787425-425678999999819885758999559603078733-266788977450
Q gi|254780137|r 181 TAVTVTAATLNGMKLVGKKFSDIKIVTLGA-GAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREK-KFDKWKSVYAQK 258 (779)
Q Consensus 181 Ta~v~lA~llnAl~~~gk~l~~~~iv~~Ga-GaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~-~~~~~~~~~a~~ 258 (779)
T Consensus 7 TAAA~Va~vekal~~~g~dl~g~~~~V~G~tG~vG~~~A~~lA~~Ga---~v~lv~R~~----ek~~~~a~~i~~r~g~~ 79 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDL----ERAQKAADSLRARFGEG 79 (194)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCH----HHHHHHHHHHHHHCCCC
T ss_conf 99999999999999829986798899985885789999999998399---799995878----88999999999970987
Q ss_pred C------CCCCHHHHCCCCCEEEECCCCCCCC-HHHHHHCCCCCEEEEECCCCCCCCH
Q ss_conf 8------8988888605883786257887789-8899721899779991787200998
Q gi|254780137|r 259 S------GPKPLSETMNNADVFLGLSVAGALD-PAILKFMAEKPLIMVLANPNPEAMP 309 (779)
Q Consensus 259 ~------~~~~l~ea~~~adv~iG~S~~g~~t-~e~v~~M~~~PiIfaLsNP~pEi~p 309 (779)
T Consensus 80 ~~~~~~~~~~~~~~~l~~adiV~~a~aAGv~~~~~~~-~~~k~l~Vv~DVNAvPP~Gi 136 (194)
T cd01078 80 VGAVETSDDAARAAAIKGADVVFAAGAAGVELLEKLA-WAPKPLAVAADVNAVPPVGI 136 (194)
T ss_pred CCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHH-HCCCCCEEEEECCCCCCCCC
T ss_conf 3113578877899774669899964277788878888-50888659986589998550