HHsearch alignment for GI: 254780137 and conserved domain: cd01079
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=91.14 E-value=1.1 Score=23.78 Aligned_cols=108 Identities=13% Similarity=0.198 Sum_probs=73.5
Q ss_pred HHHHHHHHHHH---------HCCCHHHCEEEEECCCHH-HHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHH
Q ss_conf 99999999997---------098822411787425425-67899999981988575899955960307873326678897
Q gi|254780137|r 185 VTAATLNGMKL---------VGKKFSDIKIVTLGAGAA-ALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSV 254 (779)
Q Consensus 185 ~lA~llnAl~~---------~gk~l~~~~iv~~GaGaA-g~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~ 254 (779)
T Consensus 36 TP~gv~~LL~~~~i~~~~~~yg~~l~Gk~vvVIGRS~iVGkPla~LL~~~~A---TVt~~d~~~~~~~~~~~~~~~~~~~ 112 (197)
T cd01079 36 TPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGA---RVYSVDINGIQVFTRGESIRHEKHH 112 (197)
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCC---EEEEECCCCEEEEECCCCCCCEEEE
T ss_conf 6999999999718554332357788999899989873154889999973899---6775034421464046652212456
Q ss_pred HHHCCCCCCHHHHCCCCCEEEECC-CCCC-CCHHHHHHCCCCCEEEEE
Q ss_conf 745088988888605883786257-8877-898899721899779991
Q gi|254780137|r 255 YAQKSGPKPLSETMNNADVFLGLS-VAGA-LDPAILKFMAEKPLIMVL 300 (779)
Q Consensus 255 ~a~~~~~~~l~ea~~~adv~iG~S-~~g~-~t~e~v~~M~~~PiIfaL 300 (779)
T Consensus 113 --~~~~~~~~~~~~~~aDIvI~avg~p~~~i~~~~vk---~GaivIDv 155 (197)
T cd01079 113 --VTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLK---DGAICINF 155 (197)
T ss_pred --ECCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHCC---CCCEEEEE
T ss_conf --41421005654234799998878776656675544---89689981