HHsearch alignment for GI: 254780137 and conserved domain: cd01339

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=91.69  E-value=0.47  Score=26.32  Aligned_cols=102  Identities=18%  Similarity=0.233  Sum_probs=62.0

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCC--CCHHHHCCCCCEEEECCC---
Q ss_conf             787425425678999999819885758999559603078733266788977450889--888886058837862578---
Q gi|254780137|r  205 IVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKSGP--KPLSETMNNADVFLGLSV---  279 (779)
Q Consensus       205 iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~~~--~~l~ea~~~adv~iG~S~---  279 (779)
T Consensus         1 V~IIGaG~VG~~~a~~l~~~~~~--el~L~D~~~~~a~g~a~DL~~~~~~~~~~~~v~~~~d~~~~~daDvvVitaG~~~   78 (300)
T cd01339           1 ISIIGAGNVGATLAQLLALKELG--DVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIPR   78 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCEEEEECCCCC
T ss_conf             98989688899999999857996--7999809998005798877613201589858994788799479989999067789


Q ss_pred             -CCCCCH--------HHHHH-------CCCCCEEEEECCCCCCCCH
Q ss_conf             -877898--------89972-------1899779991787200998
Q gi|254780137|r  280 -AGALDP--------AILKF-------MAEKPLIMVLANPNPEAMP  309 (779)
Q Consensus       280 -~g~~t~--------e~v~~-------M~~~PiIfaLsNP~pEi~p  309 (779)
T Consensus        79 k~g~-tR~dLl~~N~~I~~~i~~~i~~~~p~~i~lvvsNPvDv~t~  123 (300)
T cd01339          79 KPGM-SRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTY  123 (300)
T ss_pred             CCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf             9899-88999998899999999999965998489982793899999