HHsearch alignment for GI: 254780137 and conserved domain: cd05293

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.30  E-value=0.31  Score=27.52  Aligned_cols=105  Identities=16%  Similarity=0.264  Sum_probs=63.2

Q ss_pred             HCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCC---CCCHHHHCCCCCEEEECC
Q ss_conf             41178742542567899999981988575899955960307873326678897745088---988888605883786257
Q gi|254780137|r  202 DIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQKSG---PKPLSETMNNADVFLGLS  278 (779)
Q Consensus       202 ~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~~~~---~~~l~ea~~~adv~iG~S  278 (779)
T Consensus         3 r~Kv~IIGaG~VG~~~A~~l~~~~l~~-el~L~Di~~~~a~g~a~Dl~h~-~~~~~~~~v~~~~d~-~~~~~aDvVVitA   79 (312)
T cd05293           3 RNKVTVVGVGQVGMACAISILAKGLAD-ELVLVDVVEDKLKGEAMDLQHG-SAFLKNPKIEADKDY-SVTANSKVVIVTA   79 (312)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCC-EEEEEECCCCCCHHHHHHHHHC-CCCCCCCEEEECCCH-HHHCCCCEEEECC
T ss_conf             886999897888999999999669988-7999938898332688886604-012798559937999-9968999999889


Q ss_pred             C----CCCCCH------------HHHHH---CCCCCEEEEECCCCCCCCHH
Q ss_conf             8----877898------------89972---18997799917872009988
Q gi|254780137|r  279 V----AGALDP------------AILKF---MAEKPLIMVLANPNPEAMPD  310 (779)
Q Consensus       279 ~----~g~~t~------------e~v~~---M~~~PiIfaLsNP~pEi~p~  310 (779)
T Consensus        80 G~~~k~g-~~R~dLl~~N~~I~~~i~~~i~~~~p~~ivivvsNPvDv~t~~  129 (312)
T cd05293          80 GARQNEG-ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYV  129 (312)
T ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
T ss_conf             9999989-8889999988999999999988419984699668918999999