HHsearch alignment for GI: 254780137 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=97.31 E-value=0.017 Score=36.27 Aligned_cols=135 Identities=16% Similarity=0.187 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHH---H
Q ss_conf 8999999999999970988224117874254256789999998198857589995596030787332667889774---5
Q gi|254780137|r 181 TAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYA---Q 257 (779)
Q Consensus 181 Ta~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a---~ 257 (779)
T Consensus 17 TG~Gv~~~~~~~~~~~~~~l~g~~vaIQGfGnVG~~aA~~l~e~Gak--vVaVsD~~G~i~~~--~Gld~~~l~~l~~~k 92 (254)
T cd05313 17 TGYGLVYFVEEMLKDRNETLKGKRVAISGSGNVAQYAAEKLLELGAK--VVTLSDSKGYVYDP--DGFTGEKLAELKEIK 92 (254)
T ss_pred EHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCEEECC--CCCCHHHHHHHHHHH
T ss_conf 10889999999999679695899999989779999999999977997--99998578508879--999889999999999
Q ss_pred CCCCCCH---------------HHHC-CCCCEEEECCCCCCCCHHHHHHCCCC--CEEEEECC-CC-CCCCHHHHHHHCC
Q ss_conf 0889888---------------8860-58837862578877898899721899--77999178-72-0099889985189
Q gi|254780137|r 258 KSGPKPL---------------SETM-NNADVFLGLSVAGALDPAILKFMAEK--PLIMVLAN-PN-PEAMPDEIKKVRP 317 (779)
Q Consensus 258 ~~~~~~l---------------~ea~-~~adv~iG~S~~g~~t~e~v~~M~~~--PiIfaLsN-P~-pEi~p~~a~~~~g 317 (779)
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgANgP~T~eAd--~iL~~kG 170 (254)
T cd05313 93 EVRRGRVSEYAKKYGTAKYFEGKKPWEVPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTAEAI--EVFRQAG 170 (254)
T ss_pred HHCCCCCHHHHHCCCCCEECCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHCC
T ss_conf 74687102444138985663897513304769974354667899999999967982998658899987899--9999889
Q ss_pred CEEE
Q ss_conf 8798
Q gi|254780137|r 318 DAMI 321 (779)
Q Consensus 318 ~aiv 321 (779)
T Consensus 171 I~vi 174 (254)
T cd05313 171 VLFA 174 (254)
T ss_pred CEEE
T ss_conf 8896