HHsearch alignment for GI: 254780137 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=94.81 E-value=0.33 Score=27.36 Aligned_cols=135 Identities=21% Similarity=0.261 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHH---
Q ss_conf 89999999999999709882241178742542567899999981988575899955960307873326678897745---
Q gi|254780137|r 181 TAVTVTAATLNGMKLVGKKFSDIKIVTLGAGAAALACLNLLVTMGVRRENIWVYDLEGLVYEGREKKFDKWKSVYAQ--- 257 (779)
Q Consensus 181 Ta~v~lA~llnAl~~~gk~l~~~~iv~~GaGaAg~~~a~ll~~~g~~~~~i~~~D~~Gli~~~r~~~~~~~~~~~a~--- 257 (779)
T Consensus 109 T~~RTaA~sala~~~Lar~-da~~l~iiGaG~QA~~~l~al~~v~-~i~~v~v~~r~-------~~~~~~f~~~~~~~~~ 179 (312)
T pfam02423 109 TALRTAAASAVAAKYLAPP-DASTLAIIGAGAQAEFQAEALSAVL-PIEEIRIYDRD-------PEAAEKFARNLQGKGF 179 (312)
T ss_pred HHHHHHHHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHHHC-CCCEEEEEECC-------HHHHHHHHHHHHHCCC
T ss_conf 3556778889999974169-9757999646253899999999619-97689999689-------8999999999983499
Q ss_pred -CCCCCCHHHHCCCCCEEEECC-C-C-CCCCHHHHHHCCCCCEEEEECCCCC---CCCHHHHHHHCCCEEECCCCCCCCC
Q ss_conf -088988888605883786257-8-8-7789889972189977999178720---0998899851898798058878877
Q gi|254780137|r 258 -KSGPKPLSETMNNADVFLGLS-V-A-GALDPAILKFMAEKPLIMVLANPNP---EAMPDEIKKVRPDAMICTGRSDFSN 330 (779)
Q Consensus 258 -~~~~~~l~ea~~~adv~iG~S-~-~-g~~t~e~v~~M~~~PiIfaLsNP~p---Ei~p~~a~~~~g~aivatGrs~~pn 330 (779)
T Consensus 180 ~v~~~~~~~~av~~ADIIvtaT~s~~~P~~~~~~l~---~G~hv~~vGs~~p~~~El~~~~~~~--a~-v~v----D~~~ 249 (312)
T pfam02423 180 EIVACTSAEEAVEGADIVVTVTPDKEFPILKAEWVK---PGVHINAVGADCPGKTELDPDILLR--AD-IFV----DYPP 249 (312)
T ss_pred CEEEECCHHHHHHCCCEEEEEECCCCCCCCCHHHCC---CCCEEEEECCCCCCCCCCCHHHHHC--CC-EEE----CCHH
T ss_conf 659948999997149989997359977500778838---9868997269999704368999820--81-760----6689
Q ss_pred CCCH
Q ss_conf 4350
Q gi|254780137|r 331 QVNN 334 (779)
Q Consensus 331 Q~NN 334 (779)
T Consensus 250 ~~~~ 253 (312)
T pfam02423 250 QARI 253 (312)
T ss_pred HHHH
T ss_conf 9985