HHsearch alignment for GI: 254780137 and conserved domain: pfam04166

>pfam04166 PdxA Pyridoxal phosphate biosynthetic protein PdxA. In Escherichia coli the coenzyme pyridoxal 5'-phosphate is synthesized de novo by a pathway that is thought to involve the condensation of 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose, catalysed by the enzymes PdxA and PdxJ, to form either pyridoxine (vitamin B6) or pyridoxine 5'-phosphate.
Probab=98.83  E-value=1.1e-07  Score=72.13  Aligned_cols=249  Identities=13%  Similarity=0.118  Sum_probs=148.6

Q ss_pred             CCEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHH-----HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHH
Q ss_conf             75089995598999999998498766546842306202556789-----9999999876379998999999862535678
Q gi|254780137|r  481 NIARPVLIGSLLTIQDNIRRHDLQIIATKDFDVIDLNNKQSLKD-----YVDSYRSLSAEKGISLDSIYDLLRSNTTLLG  555 (779)
Q Consensus       481 Gia~PILVG~~e~I~~~~~~~gL~l~~~~dieIidp~~~~~~~~-----ya~~l~~~~~RKG~~~~~A~~~vr~d~~~fa  555 (779)
T Consensus         7 ~~C~PVViGd~~lL~~~ak~lgl~~~----i~~I~~~~~~~~~~~~i~~v~~~~~~~~~~~Gk~s~~~G~~~~-~~l~~A   81 (299)
T pfam04166         7 EKCTPVVIADEALLERAAKLLGLPLD----LRDIEFVEPAQEEPAGLLVIDPLPLKVPVVAGEVSAASGAYVL-ETLARA   81 (299)
T ss_pred             CCCCEEEEECHHHHHHHHHHCCCCCE----EEEECCHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH-HHHHHH
T ss_conf             28979999899999999998299953----8980875544225687689705656777788985889999999-999999


Q ss_pred             HHHHHCCCCCEEECCCCCCC-------CHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CEEEEECCCC-----CCCCC
Q ss_conf             99986572100100446777-------40467777763068766850121001355777-3499974736-----88989
Q gi|254780137|r  556 SLALKRGEGDGMICMCDSES-------GYNSHLTDIHKIIGMGLGISHYSAMSMCIVRD-NFLFFTDTHV-----SAEPS  622 (779)
Q Consensus       556 a~MV~~G~AD~lI~G~~~t~-------~y~~~lr~~~~vIG~~~g~~~vs~~~il~~~~-~~lFiaDtaV-----Ni~Pt  622 (779)
T Consensus        82 v~~~~~g~~dalVT~PInK~~i~~ag~~f~GHTE~La~~~~~~----~~-~M-ml~~~~LrV~lv-TtHipLk~V~~~It  154 (299)
T pfam04166        82 VALALDGEFDAIVTGPINKGALKDAGIPYSGHTEFLAERTGTH----SV-VM-MLATGDLRVALV-TTHIPLKDVPDAIT  154 (299)
T ss_pred             HHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCC----CE-EE-EEECCCCEEEEE-CCCCCHHHHHHHHH
T ss_conf             9999759988999797388999867999898689998763689----73-79-996497489995-34656999998751


Q ss_pred             HHHHHHHHHHHHHHHH-HCCCC-CCEEEEEE----CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCHHHH
Q ss_conf             8899999999999999-81899-72999970----255788897789999999999873799599867304653298989
Q gi|254780137|r  623 AMEIADSTILASQAIC-SLGMR-PKVSVLFH----SNSGSHCIKSSLKMRDSFEKICELSKNLEVDAIVQEEVCLSEIFC  696 (779)
Q Consensus       623 aEqLAdIa~~aa~~ar-~lGie-PkVAlLS~----SnfGs~~~~s~~kvr~A~eil~~~~pd~~VDGemq~D~AL~~~ia  696 (779)
T Consensus       155 ~~~I~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~iI~Pai~~~~~--~gi~v~GP~paDt~F~~~~~  232 (299)
T pfam04166       155 FELVEDFLRLLHKALREKFGIAEPRIAVAGLNPHAGEGGVLGREEIEEIIPALEQARA--EGIDLLGPLPADTAFRPVLL  232 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCCCCCCCCHHHHHHHHC
T ss_conf             9999999999999999964998980899944887665555641447888999999885--49975889794377654110


Q ss_pred             HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEECHHHCCCCCCEEECCCCC-CHHHH
Q ss_conf             6308998777777778818912888999999986598687144314589879878763-89889
Q gi|254780137|r  697 DKDVPNTSSSQDAQLLVFPNIDSANIALEMAKSVTNGLHIGTLLLGAALPVHIVPSSV-SVREI  759 (779)
Q Consensus       697 ~~K~p~S~laG~ANVLIfPnLeAaNI~yKllq~lgga~aiGPIL~G~~kPV~ilsr~~-Sv~dI  759 (779)
T Consensus       233 ~----------~~D~v~amYHDQglip~K~~~f~~~v-n---~t~GL--p~irtS~dHGta~di  280 (299)
T pfam04166       233 G----------RYDAVLAMYHDQGLIPLKYLGFDRGV-N---VTLGL--PIIRTSVDHGTAFDI  280 (299)
T ss_pred             C----------CCCEEEEECCCCCCHHHHHCCCCCCE-E---EECCC--CEEEECCCCCCHHHH
T ss_conf             5----------78999980524420766533568737-9---94489--923778998705666