HHsearch alignment for GI: 254780137 and conserved domain: pfam04166
>pfam04166 PdxA Pyridoxal phosphate biosynthetic protein PdxA. In Escherichia coli the coenzyme pyridoxal 5'-phosphate is synthesized de novo by a pathway that is thought to involve the condensation of 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose, catalysed by the enzymes PdxA and PdxJ, to form either pyridoxine (vitamin B6) or pyridoxine 5'-phosphate.
Probab=98.83 E-value=1.1e-07 Score=72.13 Aligned_cols=249 Identities=13% Similarity=0.118 Sum_probs=148.6
Q ss_pred CCEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHH-----HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHH
Q ss_conf 75089995598999999998498766546842306202556789-----9999999876379998999999862535678
Q gi|254780137|r 481 NIARPVLIGSLLTIQDNIRRHDLQIIATKDFDVIDLNNKQSLKD-----YVDSYRSLSAEKGISLDSIYDLLRSNTTLLG 555 (779)
Q Consensus 481 Gia~PILVG~~e~I~~~~~~~gL~l~~~~dieIidp~~~~~~~~-----ya~~l~~~~~RKG~~~~~A~~~vr~d~~~fa 555 (779)
T Consensus 7 ~~C~PVViGd~~lL~~~ak~lgl~~~----i~~I~~~~~~~~~~~~i~~v~~~~~~~~~~~Gk~s~~~G~~~~-~~l~~A 81 (299)
T pfam04166 7 EKCTPVVIADEALLERAAKLLGLPLD----LRDIEFVEPAQEEPAGLLVIDPLPLKVPVVAGEVSAASGAYVL-ETLARA 81 (299)
T ss_pred CCCCEEEEECHHHHHHHHHHCCCCCE----EEEECCHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH-HHHHHH
T ss_conf 28979999899999999998299953----8980875544225687689705656777788985889999999-999999
Q ss_pred HHHHHCCCCCEEECCCCCCC-------CHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CEEEEECCCC-----CCCCC
Q ss_conf 99986572100100446777-------40467777763068766850121001355777-3499974736-----88989
Q gi|254780137|r 556 SLALKRGEGDGMICMCDSES-------GYNSHLTDIHKIIGMGLGISHYSAMSMCIVRD-NFLFFTDTHV-----SAEPS 622 (779)
Q Consensus 556 a~MV~~G~AD~lI~G~~~t~-------~y~~~lr~~~~vIG~~~g~~~vs~~~il~~~~-~~lFiaDtaV-----Ni~Pt 622 (779)
T Consensus 82 v~~~~~g~~dalVT~PInK~~i~~ag~~f~GHTE~La~~~~~~----~~-~M-ml~~~~LrV~lv-TtHipLk~V~~~It 154 (299)
T pfam04166 82 VALALDGEFDAIVTGPINKGALKDAGIPYSGHTEFLAERTGTH----SV-VM-MLATGDLRVALV-TTHIPLKDVPDAIT 154 (299)
T ss_pred HHHHHCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCC----CE-EE-EEECCCCEEEEE-CCCCCHHHHHHHHH
T ss_conf 9999759988999797388999867999898689998763689----73-79-996497489995-34656999998751
Q ss_pred HHHHHHHHHHHHHHHH-HCCCC-CCEEEEEE----CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCHHHH
Q ss_conf 8899999999999999-81899-72999970----255788897789999999999873799599867304653298989
Q gi|254780137|r 623 AMEIADSTILASQAIC-SLGMR-PKVSVLFH----SNSGSHCIKSSLKMRDSFEKICELSKNLEVDAIVQEEVCLSEIFC 696 (779)
Q Consensus 623 aEqLAdIa~~aa~~ar-~lGie-PkVAlLS~----SnfGs~~~~s~~kvr~A~eil~~~~pd~~VDGemq~D~AL~~~ia 696 (779)
T Consensus 155 ~~~I~~~i~~~~~~l~~~~gi~~PrIaV~gLNPHaGE~G~~G~EE~~iI~Pai~~~~~--~gi~v~GP~paDt~F~~~~~ 232 (299)
T pfam04166 155 FELVEDFLRLLHKALREKFGIAEPRIAVAGLNPHAGEGGVLGREEIEEIIPALEQARA--EGIDLLGPLPADTAFRPVLL 232 (299)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCCCCCCCCHHHHHHHHC
T ss_conf 9999999999999999964998980899944887665555641447888999999885--49975889794377654110
Q ss_pred HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEECHHHCCCCCCEEECCCCC-CHHHH
Q ss_conf 6308998777777778818912888999999986598687144314589879878763-89889
Q gi|254780137|r 697 DKDVPNTSSSQDAQLLVFPNIDSANIALEMAKSVTNGLHIGTLLLGAALPVHIVPSSV-SVREI 759 (779)
Q Consensus 697 ~~K~p~S~laG~ANVLIfPnLeAaNI~yKllq~lgga~aiGPIL~G~~kPV~ilsr~~-Sv~dI 759 (779)
T Consensus 233 ~----------~~D~v~amYHDQglip~K~~~f~~~v-n---~t~GL--p~irtS~dHGta~di 280 (299)
T pfam04166 233 G----------RYDAVLAMYHDQGLIPLKYLGFDRGV-N---VTLGL--PIIRTSVDHGTAFDI 280 (299)
T ss_pred C----------CCCEEEEECCCCCCHHHHHCCCCCCE-E---EECCC--CEEEECCCCCCHHHH
T ss_conf 5----------78999980524420766533568737-9---94489--923778998705666