HHsearch alignment for GI: 254780138 and conserved domain: cd06844

>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=98.32  E-value=3e-06  Score=62.43  Aligned_cols=85  Identities=15%  Similarity=0.329  Sum_probs=72.8

Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH---HCCCCCCCCCCCHHHH
Q ss_conf             5882799984035635522007999986431167880899701051521299999999997---5187643158991269
Q gi|254780138|r    3 ENGITVFRFAGNWKSPEISEIADDVVMAINKSIQSDSAIVDLSAITEIDTIGAELIMYFME---KYHGKIKLQGVSTHIE   79 (373)
Q Consensus         3 ~dG~~vL~LsGdWTl~~l~~l~~~l~~~L~~~~~~~~i~iDls~i~~lDTAGA~lL~~l~~---~~~~~~~~~~l~~~~~   79 (373)
T Consensus         6 ~d~~lVv~l~GelD~~ta~~lr~~l~~~i~~~-~~~~iVvDls~v~f~DSsGl~~Ll~~~k~~~~~Gg~l~l~~~~p~V~   84 (100)
T cd06844           6 VDDYWVVRLEGELDHHSVEQFKEELLHNITNV-AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVR   84 (100)
T ss_pred             ECCEEEEEEEEEECHHHHHHHHHHHHHHHHHC-CCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
T ss_conf             99999999779983888999999999999738-99789998768818847899999999999996699899983998999


Q ss_pred             HHHHHHHHH
Q ss_conf             999988642
Q gi|254780138|r   80 QLFSLISFT   88 (373)
Q Consensus        80 ~Ll~Ll~~~   88 (373)
T Consensus        85 ~vf~~tGld   93 (100)
T cd06844          85 ITLTESGLD   93 (100)
T ss_pred             HHHHHHCCC
T ss_conf             999994868