RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 80.1 bits (197), Expect = 5e-16
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 30/231 (12%)

Query: 16   VRNLT--IELNNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVL 73
            V+NL    E + R  ++ +N+     +I   +G +G GK+  +  + GL+P  SG V V 
Sbjct: 931  VKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990

Query: 74   GEHL--NLAKGKQNFAFSAKLGVLFQHGALFSSMTVQENISMPIK--------EHLNLPA 123
            G+ +  NL   +Q+      LG+  QH  LF  +TV E+I    +          L + A
Sbjct: 991  GKDIETNLDAVRQS------LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEA 1044

Query: 124  DLIEHIVHTKIAIVGLPPETANLMPFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDP 183
             L +  +H K           N     LSGGM +++S+A A   D  ++ LDEPTSG+DP
Sbjct: 1045 MLEDTGLHHK----------RNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDP 1094

Query: 184  IAAEEFDKLLIKLRHSLGLSVYMITHDLNNLISTCNRVAVIQKKGIMKEGT 234
             +      LL+K R   G ++ M TH ++      +R+A+I +  +   GT
Sbjct: 1095 YSRRSIWDLLLKYRS--GRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGT 1143