RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 62.8 bits (153), Expect = 7e-11
Identities = 69/252 (27%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 14 LSVRNLTIEL--NNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRV----S 67
+ RN+T +R L++I+L I GE + ++G SG+GKS L+ LIPR S
Sbjct: 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVN----LIPRFYEPDS 386
Query: 68 GEVKVLG---EHLNLAKGKQNFAFSAKLGVLFQHGALFSSMTVQENI--------SMPIK 116
G++ + G LA ++ A + Q LF+ T+ NI
Sbjct: 387 GQILLDGHDLADYTLASLRRQVALVS------QDVVLFND-TIANNIAYGRTEQADRAEI 439
Query: 117 EHLNLPADLIEHI------VHTKIAIVGLPPETANLMPFQLSGGMIKRVSLARALAIDPD 170
E A + + + T I G+ LSGG +R+++ARAL D
Sbjct: 440 ERALAAAYAQDFVDKLPLGLDTPIGENGV----------LLSGGQRQRLAIARALLKDAP 489
Query: 171 LLFLDEPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMITHDLNNLISTCNRVAVIQKKGIM 230
+L LDE TS LD + L +L G + +I H L+ I +R+ V+ I+
Sbjct: 490 ILILDEATSALDNESERLVQAALERLMQ--GRTTLVIAHRLST-IEKADRIVVMDDGRIV 546
Query: 231 KEGTISDIVDSN 242
+ GT ++++ N
Sbjct: 547 ERGTHNELLARN 558